Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.45□□□□□ -2.02
SNRNP200O75643 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.45□□□□□ -2.02
SNRNP200O75643 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.45□□□□□ -2.02
SNRNP200O75643 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.45□□□□□ -2.02
SNRNP200O75643 RN7SL283P-201ENST00000489055 303 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.45□□□□□ -2.02
SNRNP200O75643 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.45□□□□□ -2.02
SNRNP200O75643 AL133271.1-201ENST00000538229 291 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 MTND2P17-201ENST00000550281 688 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.45□□□□□ -2.02
SNRNP200O75643 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 AC010809.3-201ENST00000621310 641 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.45□□□□□ -2.02
SNRNP200O75643 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SNRNP200O75643 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SNRNP200O75643 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SNRNP200O75643 AC069528.2-201ENST00000624849 1991 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
SNRNP200O75643 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SNRNP200O75643 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SNRNP200O75643 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SNRNP200O75643 RN7SKP223-201ENST00000410582 62 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 TRGV6-201ENST00000417928 299 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 AC063976.3-201ENST00000426849 329 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.45□□□□□ -2.02
SNRNP200O75643 KC877373.1-201ENST00000479066 408 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.45□□□□□ -2.02
SNRNP200O75643 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.45□□□□□ -2.02
SNRNP200O75643 RNA5SP148-201ENST00000516527 94 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.45□□□□□ -2.02
SNRNP200O75643 AP003122.3-201ENST00000526316 255 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.45□□□□□ -2.02
SNRNP200O75643 ABI1P1-201ENST00000603375 1120 ntBASIC2.45□□□□□ -2.02
SNRNP200O75643 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.45□□□□□ -2.02
SNRNP200O75643 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.45□□□□□ -2.02
SNRNP200O75643 AC103988.1-201ENST00000566382 2177 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SNRNP200O75643 DCAF13P3-201ENST00000561147 1334 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 MIR92A2-201ENST00000385299 75 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SNRNP200O75643 AL590004.2-201ENST00000404787 371 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRNP200O75643 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SNRNP200O75643 MTCO3P21-201ENST00000430791 643 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SNRNP200O75643 AC006483.1-201ENST00000487308 313 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.44□□□□□ -2.02
SNRNP200O75643 RNU6-943P-201ENST00000516960 98 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC027309.2-201ENST00000520566 192 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AP002812.4-201ENST00000532139 286 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.44□□□□□ -2.02
SNRNP200O75643 TPMTP1-201ENST00000592307 737 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.44□□□□□ -2.02
SNRNP200O75643 CUL1P1-201ENST00000509510 2425 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 FAM35BP-202ENST00000497389 3337 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC080125.1-201ENST00000414888 684 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 PTGES3P5-201ENST00000455109 434 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRNP200O75643 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRNP200O75643 AC061975.8-201ENST00000587058 721 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRNP200O75643 DNAJC19P3-201ENST00000594491 331 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC079089.3-201ENST00000603094 673 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRNP200O75643 AC103810.6-201ENST00000606708 136 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC005156.1-201ENST00000613371 573 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC009159.1-201ENST00000618386 642 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 AC010338.1-201ENST00000621823 717 ntBASIC2.44□□□□□ -2.02
SNRNP200O75643 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.44□□□□□ -2.02
SNRNP200O75643 AC092326.2-201ENST00000624772 1561 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 AC138915.3-201ENST00000562908 1389 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SNRNP200O75643 MIR196B-201ENST00000384852 84 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 SNORA81-201ENST00000408493 178 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 NDUFB4P5-201ENST00000415445 361 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 CACYBPP1-201ENST00000438592 684 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 AC012181.1-201ENST00000479895 423 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 AC010627.1-201ENST00000503819 1294 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.43□□□□□ -2.02
SNRNP200O75643 SNORA35B-201ENST00000607417 129 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SNRNP200O75643 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SNRNP200O75643 FAM35CP-201ENST00000554755 2470 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 AC097714.1-201ENST00000511272 1647 ntBASIC2.43□□□□□ -2.02
SNRNP200O75643 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
SNRNP200O75643 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.43□□□□□ -2.02
SNRNP200O75643 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SNRNP200O75643 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SNRNP200O75643 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SNRNP200O75643 RNU4-82P-201ENST00000362443 140 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SNRNP200O75643 BTF3P7-201ENST00000407097 488 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 RPS20P25-201ENST00000412447 352 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 BTF3P9-201ENST00000418784 283 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 USP9YP36-201ENST00000424581 829 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP200O75643 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.42□□□□□ -2.02
SNRNP200O75643 FCF1P1-201ENST00000432690 571 ntBASIC2.42□□□□□ -2.02
SNRNP200O75643 AL606490.7-201ENST00000433136 191 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms