Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC002400.1-201ENST00000569310 726 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AL669831.4-202ENST00000590817 238 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AC005255.1-201ENST00000593748 216 ntBASIC3.76□□□□□ -1.81
SSX4O60224 BPIFA4P-203ENST00000603168 689 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AC106791.2-201ENST00000604680 391 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AC113403.1-201ENST00000604910 193 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AL133507.1-201ENST00000605269 557 ntBASIC3.76□□□□□ -1.81
SSX4O60224 AC018638.7-201ENST00000605836 1114 ntBASIC3.76□□□□□ -1.81
SSX4O60224 HMGN2P28-201ENST00000606102 262 ntBASIC3.76□□□□□ -1.81
SSX4O60224 uc_338.13-201ENST00000618243 179 ntBASIC3.76□□□□□ -1.81
SSX4O60224 Z99129.2-201ENST00000619967 314 ntBASIC3.76□□□□□ -1.81
SSX4O60224 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.76□□□□□ -1.81
SSX4O60224 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX4O60224 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
SSX4O60224 AC125257.1-201ENST00000560400 2930 ntBASIC3.76□□□□□ -1.81
SSX4O60224 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SSX4O60224 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SSX4O60224 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX4O60224 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX4O60224 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX4O60224 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX4O60224 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 AC008033.1-201ENST00000216407 1162 ntBASIC3.75□□□□□ -1.81
SSX4O60224 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SSX4O60224 SNORA37-201ENST00000384504 129 ntBASIC3.75□□□□□ -1.81
SSX4O60224 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SSX4O60224 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX4O60224 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX4O60224 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.75□□□□□ -1.81
SSX4O60224 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.75□□□□□ -1.81
SSX4O60224 ZYG11AP1-201ENST00000430329 837 ntBASIC3.75□□□□□ -1.81
SSX4O60224 BMS1P19-201ENST00000433925 393 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AL591503.2-201ENST00000442314 1005 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AC005297.2-201ENST00000450430 606 ntBASIC3.75□□□□□ -1.81
SSX4O60224 RPL23AP35-201ENST00000451906 501 ntBASIC3.75□□□□□ -1.81
SSX4O60224 FABP3P2-201ENST00000453169 399 ntBASIC3.75□□□□□ -1.81
SSX4O60224 ART2BP-201ENST00000453501 499 ntBASIC3.75□□□□□ -1.81
SSX4O60224 USP9YP10-201ENST00000454868 628 ntBASIC3.75□□□□□ -1.81
SSX4O60224 DHFRP3-201ENST00000455595 559 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX4O60224 RPS20P24-201ENST00000457473 361 ntBASIC3.75□□□□□ -1.81
SSX4O60224 RNU7-136P-201ENST00000458819 69 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AC053481.1-201ENST00000467217 306 ntBASIC3.75□□□□□ -1.81
SSX4O60224 LINC00888-204ENST00000487386 421 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 AP000563.1-201ENST00000490865 758 ntBASIC3.75□□□□□ -1.81
SSX4O60224 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX4O60224 AC104685.1-201ENST00000502445 371 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 AC108475.1-201ENST00000507880 950 ntBASIC3.75□□□□□ -1.81
SSX4O60224 USP9YP5-201ENST00000511770 630 ntBASIC3.75□□□□□ -1.81
SSX4O60224 MRPS33P3-201ENST00000513456 322 ntBASIC3.75□□□□□ -1.81
SSX4O60224 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 RNU6-150P-201ENST00000516237 95 ntBASIC3.75□□□□□ -1.81
SSX4O60224 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SSX4O60224 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.75□□□□□ -1.81
SSX4O60224 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX4O60224 AP003730.1-201ENST00000524605 285 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AP003385.6-201ENST00000531603 374 ntBASIC3.75□□□□□ -1.81
SSX4O60224 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX4O60224 AC008015.1-201ENST00000555505 465 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AC025884.1-201ENST00000556034 378 ntBASIC3.75□□□□□ -1.81
SSX4O60224 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AC106785.1-201ENST00000565935 262 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX4O60224 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.75□□□□□ -1.81
SSX4O60224 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX4O60224 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.75□□□□□ -1.81
SSX4O60224 VN1R90P-201ENST00000595717 726 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AL355812.1-201ENST00000603215 216 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AC025811.1-201ENST00000604312 472 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AL360219.1-201ENST00000610230 366 ntBASIC3.75□□□□□ -1.81
SSX4O60224 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX4O60224 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSX4O60224 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.75□□□□□ -1.81
SSX4O60224 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.75□□□□□ -1.81
SSX4O60224 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SSX4O60224 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX4O60224 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX4O60224 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSX4O60224 OR5H2-201ENST00000355273 945 ntBASIC3.74□□□□□ -1.81
SSX4O60224 MIR423-201ENST00000362201 94 ntBASIC3.74□□□□□ -1.81
SSX4O60224 RNU1-132P-201ENST00000364300 164 ntBASIC3.74□□□□□ -1.81
SSX4O60224 RNU6-878P-201ENST00000384578 110 ntBASIC3.74□□□□□ -1.81
SSX4O60224 U3.29-201ENST00000391296 212 ntBASIC3.74□□□□□ -1.81
SSX4O60224 SNORA48.7-201ENST00000391302 135 ntBASIC3.74□□□□□ -1.81
SSX4O60224 AL022722.2-201ENST00000402519 180 ntBASIC3.74□□□□□ -1.81
SSX4O60224 RN7SKP56-201ENST00000410513 331 ntBASIC3.74□□□□□ -1.81
SSX4O60224 RNU4-78P-201ENST00000410940 126 ntBASIC3.74□□□□□ -1.81
SSX4O60224 RPL7P30-201ENST00000420888 709 ntBASIC3.74□□□□□ -1.81
SSX4O60224 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.74□□□□□ -1.81
SSX4O60224 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.74□□□□□ -1.81
SSX4O60224 PSMA6P3-201ENST00000428242 164 ntBASIC3.74□□□□□ -1.81
SSX4O60224 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.74□□□□□ -1.81
SSX4O60224 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms