Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.08□□□□□ -1.76
LDB2O43679 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.08□□□□□ -1.76
LDB2O43679 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.08□□□□□ -1.76
LDB2O43679 AC092427.1-201ENST00000439177 601 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 ELOCP30-201ENST00000447108 299 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 RPL29P14-201ENST00000495837 428 ntBASIC4.08□□□□□ -1.76
LDB2O43679 CBX3P3-201ENST00000508108 532 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AC022447.1-201ENST00000515358 464 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.08□□□□□ -1.76
LDB2O43679 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.08□□□□□ -1.76
LDB2O43679 OR4A12P-201ENST00000530847 918 ntBASIC4.08□□□□□ -1.76
LDB2O43679 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
LDB2O43679 CR383658.2-201ENST00000547576 1525 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 AL391156.1-201ENST00000554965 554 ntBASIC4.08□□□□□ -1.76
LDB2O43679 BNIP3P5-201ENST00000562290 498 ntBASIC4.08□□□□□ -1.76
LDB2O43679 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.08□□□□□ -1.76
LDB2O43679 AC012414.6-201ENST00000568241 401 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AC136618.2-201ENST00000575091 400 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 NF1P5-201ENST00000588287 448 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.08□□□□□ -1.76
LDB2O43679 AC022146.1-201ENST00000595307 847 ntBASIC4.08□□□□□ -1.76
LDB2O43679 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.08□□□□□ -1.76
LDB2O43679 VN1R85P-201ENST00000601587 426 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AL139286.2-201ENST00000606838 396 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AC024941.1-201ENST00000612250 334 ntBASIC4.08□□□□□ -1.76
LDB2O43679 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.08□□□□□ -1.76
LDB2O43679 AL773545.4-201ENST00000637262 310 ntBASIC4.08□□□□□ -1.76
LDB2O43679 AL513478.4-201ENST00000641636 310 ntBASIC4.08□□□□□ -1.76
LDB2O43679 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LDB2O43679 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
LDB2O43679 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LDB2O43679 AL592437.2-201ENST00000421655 2434 ntBASIC4.07□□□□□ -1.76
LDB2O43679 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LDB2O43679 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LDB2O43679 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LDB2O43679 OR11H4-201ENST00000315409 1082 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 RNU6-462P-201ENST00000362659 105 ntBASIC4.07□□□□□ -1.76
LDB2O43679 RNU6-433P-201ENST00000363216 104 ntBASIC4.07□□□□□ -1.76
LDB2O43679 SNORD74.4-201ENST00000364129 80 ntBASIC4.07□□□□□ -1.76
LDB2O43679 RNU4-91P-201ENST00000364778 135 ntBASIC4.07□□□□□ -1.76
LDB2O43679 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LDB2O43679 RNU6-921P-201ENST00000384361 107 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AL022722.2-201ENST00000402519 180 ntBASIC4.07□□□□□ -1.76
LDB2O43679 RNU6-648P-201ENST00000410190 107 ntBASIC4.07□□□□□ -1.76
LDB2O43679 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LDB2O43679 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.07□□□□□ -1.76
LDB2O43679 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 LARP1BP3-201ENST00000437229 869 ntBASIC4.07□□□□□ -1.76
LDB2O43679 MUPP-201ENST00000438111 566 ntBASIC4.07□□□□□ -1.76
LDB2O43679 MTND4P6-201ENST00000438297 472 ntBASIC4.07□□□□□ -1.76
LDB2O43679 RPS4XP4-201ENST00000443195 763 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.07□□□□□ -1.76
LDB2O43679 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 AC239809.1-201ENST00000450470 217 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 SNRPGP9-201ENST00000456025 225 ntBASIC4.07□□□□□ -1.76
LDB2O43679 RPL38P1-201ENST00000460914 211 ntBASIC4.07□□□□□ -1.76
LDB2O43679 RPL30P9-201ENST00000465586 330 ntBASIC4.07□□□□□ -1.76
LDB2O43679 RPS4XP15-201ENST00000489210 795 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.07□□□□□ -1.76
LDB2O43679 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 PCMTD1P2-201ENST00000565017 355 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.07□□□□□ -1.76
LDB2O43679 AC022968.1-201ENST00000567372 442 ntBASIC4.07□□□□□ -1.76
LDB2O43679 MIR4716-201ENST00000579628 84 ntBASIC4.07□□□□□ -1.76
LDB2O43679 SNORD39.3-201ENST00000584451 71 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms