Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 OR6C5P-201ENST00000452388 923 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF3O43395 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF3O43395 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF3O43395 ST13P14-201ENST00000474095 734 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 RPS4XP15-201ENST00000489210 795 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
PRPF3O43395 AC117532.1-201ENST00000514638 323 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 MYL12AP1-201ENST00000518490 515 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 DYNLL1P4-201ENST00000549314 266 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF3O43395 MTND6P33-201ENST00000571794 183 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AL121834.1-201ENST00000572284 509 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AC090616.5-202ENST00000582111 297 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 MIR4697-201ENST00000582977 78 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF3O43395 AL365503.1-201ENST00000605247 905 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AL390208.1-201ENST00000605885 644 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AC006329.2-201ENST00000611491 394 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF3O43395 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF3O43395 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF3O43395 AC006065.5-201ENST00000623427 349 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 MIR3653-201ENST00000625572 110 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 CRYM-AS1-204ENST00000637983 556 ntBASIC4.9□□□□□ -1.63
PRPF3O43395 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF3O43395 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF3O43395 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF3O43395 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF3O43395 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
PRPF3O43395 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PRPF3O43395 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PRPF3O43395 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF3O43395 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF3O43395 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF3O43395 AL672167.1-206ENST00000356293 943 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 U3.15-201ENST00000365398 212 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.89□□□□□ -1.63
PRPF3O43395 MTCO1P17-201ENST00000411522 491 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF3O43395 TPMTP3-201ENST00000411928 735 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 RPL23AP26-201ENST00000412728 464 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF3O43395 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF3O43395 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF3O43395 AC002381.1-201ENST00000447049 280 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF3O43395 AC005297.2-201ENST00000450430 606 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 AC073387.1-201ENST00000453261 709 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 BX322784.1-201ENST00000455793 1077 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF3O43395 PPBPP1-201ENST00000510807 373 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.89□□□□□ -1.63
PRPF3O43395 HIGD1AP10-201ENST00000527837 282 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.89□□□□□ -1.63
PRPF3O43395 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.89□□□□□ -1.63
PRPF3O43395 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF3O43395 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.89□□□□□ -1.63
PRPF3O43395 AC135507.1-201ENST00000607214 561 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF3O43395 AC091965.5-201ENST00000624785 342 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PRPF3O43395 AL133243.3-201ENST00000617415 3004 ntBASIC4.89□□□□□ -1.63
PRPF3O43395 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF3O43395 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.89□□□□□ -1.63
PRPF3O43395 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF3O43395 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF3O43395 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF3O43395 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF3O43395 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF3O43395 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF3O43395 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF3O43395 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF3O43395 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PRPF3O43395 RNU6-660P-201ENST00000364566 109 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 AC025750.1-201ENST00000399891 379 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 MIR1179-201ENST00000408703 91 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 RPL7P8-201ENST00000411964 730 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF3O43395 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF3O43395 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.88□□□□□ -1.63
PRPF3O43395 RPL37P21-201ENST00000435890 276 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 HLA-N-201ENST00000437516 135 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.88□□□□□ -1.63
PRPF3O43395 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF3O43395 MTND1P9-201ENST00000453775 944 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 RPS29P19-201ENST00000479709 171 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF3O43395 COX7A2P2-201ENST00000505291 250 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 PARP4P3-201ENST00000510265 317 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF3O43395 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF3O43395 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF3O43395 SETP2-201ENST00000553886 926 ntBASIC4.88□□□□□ -1.63
PRPF3O43395 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.88□□□□□ -1.63
PRPF3O43395 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF3O43395 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF3O43395 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms