Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AP1S2P1-201ENST00000457344 379 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 RN7SL610P-201ENST00000463845 291 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 ACTR3P3-201ENST00000480448 893 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AC011825.1-201ENST00000484967 388 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AC013356.1-201ENST00000489027 564 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 AC007016.1-201ENST00000512110 244 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 RNU6-720P-201ENST00000516363 108 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 DUXAP2-201ENST00000519198 589 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 OR4R3P-201ENST00000525084 838 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 AP000676.2-201ENST00000529711 301 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.51□□□□□ -1.69
PHGDHO43175 PDCD5P1-201ENST00000543528 309 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.51□□□□□ -1.69
PHGDHO43175 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 AC034268.2-201ENST00000571784 482 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.51□□□□□ -1.69
PHGDHO43175 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.51□□□□□ -1.69
PHGDHO43175 AC004492.1-201ENST00000607036 742 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AP002360.3-201ENST00000607673 710 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AC133644.2-201ENST00000608142 540 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AP001506.1-201ENST00000615444 211 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AC090510.2-201ENST00000617465 629 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.51□□□□□ -1.69
PHGDHO43175 MIR6719-201ENST00000622428 87 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 AC006065.5-201ENST00000623427 349 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.51□□□□□ -1.69
PHGDHO43175 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.51□□□□□ -1.69
PHGDHO43175 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
PHGDHO43175 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHGDHO43175 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.51□□□□□ -1.69
PHGDHO43175 NXPH1-205ENST00000602349 1953 ntBASIC4.51□□□□□ -1.69
PHGDHO43175 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.51□□□□□ -1.69
PHGDHO43175 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHGDHO43175 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PHGDHO43175 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PHGDHO43175 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.5□□□□□ -1.69
PHGDHO43175 AC108467.2-201ENST00000617640 1597 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PHGDHO43175 AC021146.4-201ENST00000309229 279 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHGDHO43175 Y_RNA.46-201ENST00000362695 102 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 SNORD115.1-201ENST00000391109 76 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 FCF1P10-201ENST00000407590 479 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 RNU6-248P-201ENST00000410720 107 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 Y_RNA.619-201ENST00000410951 90 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 RPS3AP3-201ENST00000411933 242 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 HMGB3P23-201ENST00000414981 585 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 EIF4EP1-201ENST00000422311 642 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AC006548.1-201ENST00000427470 102 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 BX890604.2-201ENST00000427883 474 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.5□□□□□ -1.69
PHGDHO43175 RPEP2-201ENST00000432149 701 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 PTMAP6-201ENST00000439110 327 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
PHGDHO43175 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.5□□□□□ -1.69
PHGDHO43175 MTCYBP1-201ENST00000454315 1119 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AC021382.1-201ENST00000483523 359 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 RPL7P24-201ENST00000493052 752 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AC108145.1-201ENST00000503770 153 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 BNIP3P41-201ENST00000503774 571 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.5□□□□□ -1.69
PHGDHO43175 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.5□□□□□ -1.69
PHGDHO43175 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.5□□□□□ -1.69
PHGDHO43175 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PHGDHO43175 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.5□□□□□ -1.69
PHGDHO43175 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.5□□□□□ -1.69
PHGDHO43175 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.5□□□□□ -1.69
PHGDHO43175 RPL21P5-201ENST00000554662 472 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 EDDM3DP-201ENST00000554692 434 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.5□□□□□ -1.69
PHGDHO43175 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PHGDHO43175 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.5□□□□□ -1.69
PHGDHO43175 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.5□□□□□ -1.69
PHGDHO43175 MIR4646-201ENST00000580775 63 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.5□□□□□ -1.69
PHGDHO43175 AC010201.1-201ENST00000605051 540 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AC098614.4-201ENST00000607601 462 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AC087241.4-201ENST00000612441 480 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AL590099.1-201ENST00000615276 138 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PHGDHO43175 AP001784.1-201ENST00000624107 428 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 CR381572.1-201ENST00000625098 102 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHGDHO43175 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHGDHO43175 AC139769.1-204ENST00000472297 1931 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 AC026951.1-201ENST00000559530 2459 ntBASIC4.5□□□□□ -1.69
PHGDHO43175 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.5□□□□□ -1.69
PHGDHO43175 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PHGDHO43175 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 AC027287.1-201ENST00000553115 1453 ntBASIC4.49□□□□□ -1.69
PHGDHO43175 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PHGDHO43175 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.49□□□□□ -1.69
PHGDHO43175 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.49□□□□□ -1.69
PHGDHO43175 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms