Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.22□□□□□ -1.89
CLOCKO15516 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.22□□□□□ -1.89
CLOCKO15516 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.22□□□□□ -1.89
CLOCKO15516 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.22□□□□□ -1.89
CLOCKO15516 AC023824.3-201ENST00000569003 562 ntBASIC3.22□□□□□ -1.89
CLOCKO15516 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.22□□□□□ -1.89
CLOCKO15516 AL671309.1-201ENST00000603750 544 ntBASIC3.22□□□□□ -1.89
CLOCKO15516 AC010591.1-201ENST00000603941 649 ntBASIC3.22□□□□□ -1.89
CLOCKO15516 AL590282.1-201ENST00000610379 1136 ntBASIC3.22□□□□□ -1.89
CLOCKO15516 VN1R9P-201ENST00000614184 867 ntBASIC3.22□□□□□ -1.89
CLOCKO15516 AC069209.1-201ENST00000619282 651 ntBASIC3.22□□□□□ -1.89
CLOCKO15516 HPVC1-201ENST00000629899 1198 ntBASIC3.22□□□□□ -1.89
CLOCKO15516 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLOCKO15516 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLOCKO15516 MTND5P31-201ENST00000419366 1374 ntBASIC3.22□□□□□ -1.89
CLOCKO15516 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLOCKO15516 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CLOCKO15516 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLOCKO15516 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.89
CLOCKO15516 AC032011.1-201ENST00000611703 1549 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 FRG1CP-201ENST00000358464 769 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 RNU6-263P-201ENST00000363811 107 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLOCKO15516 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLOCKO15516 Y_RNA.493-201ENST00000384422 102 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.21□□□□□ -1.9
CLOCKO15516 SYF2P2-201ENST00000417620 583 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.21□□□□□ -1.9
CLOCKO15516 RPP40P1-201ENST00000426762 456 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.21□□□□□ -1.9
CLOCKO15516 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.21□□□□□ -1.9
CLOCKO15516 AL034418.1-201ENST00000448675 860 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 NPM1P13-201ENST00000452663 865 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 RPS24P6-201ENST00000452670 400 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 snoU13.24-201ENST00000458998 104 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 AC106707.2-201ENST00000484182 374 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 OR5H3P-201ENST00000502817 919 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.21□□□□□ -1.9
CLOCKO15516 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.21□□□□□ -1.9
CLOCKO15516 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.21□□□□□ -1.9
CLOCKO15516 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.21□□□□□ -1.9
CLOCKO15516 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLOCKO15516 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.21□□□□□ -1.9
CLOCKO15516 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.21□□□□□ -1.9
CLOCKO15516 AC103881.1-201ENST00000603476 538 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 AC092354.2-201ENST00000607786 514 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 AL159169.3-201ENST00000608871 561 ntBASIC3.21□□□□□ -1.9
CLOCKO15516 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.21□□□□□ -1.9
CLOCKO15516 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLOCKO15516 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
CLOCKO15516 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLOCKO15516 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLOCKO15516 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLOCKO15516 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CLOCKO15516 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
CLOCKO15516 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLOCKO15516 AC073055.1-201ENST00000456901 1621 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.2□□□□□ -1.9
CLOCKO15516 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLOCKO15516 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLOCKO15516 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CLOCKO15516 RNU4-78P-201ENST00000410940 126 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 ATP5A1P2-201ENST00000412323 255 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AC007899.1-201ENST00000412776 775 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AL445183.3-201ENST00000414168 502 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AC233981.1-201ENST00000423224 461 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.2□□□□□ -1.9
CLOCKO15516 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.2□□□□□ -1.9
CLOCKO15516 AC073063.1-201ENST00000434352 607 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AC104978.1-201ENST00000449387 391 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.2□□□□□ -1.9
CLOCKO15516 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.2□□□□□ -1.9
CLOCKO15516 AC089999.1-201ENST00000460336 374 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 RPL21P18-201ENST00000469899 480 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 MTCO3P35-201ENST00000485582 781 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AL024509.2-201ENST00000493462 493 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.2□□□□□ -1.9
CLOCKO15516 MTCO3P44-201ENST00000510977 541 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.2□□□□□ -1.9
CLOCKO15516 RANP9-201ENST00000519957 271 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.2□□□□□ -1.9
CLOCKO15516 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.2□□□□□ -1.9
CLOCKO15516 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.2□□□□□ -1.9
CLOCKO15516 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 MIR3922-201ENST00000585192 84 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AL669831.4-202ENST00000590817 238 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.2□□□□□ -1.9
CLOCKO15516 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.2□□□□□ -1.9
CLOCKO15516 AC013468.1-201ENST00000608680 598 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AL354976.1-201ENST00000613843 387 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AC105227.2-201ENST00000615075 605 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 AC006963.1-201ENST00000624003 1052 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLOCKO15516 FAM35CP-201ENST00000554755 2470 ntBASIC3.2□□□□□ -1.9
CLOCKO15516 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CLOCKO15516 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.2□□□□□ -1.9
CLOCKO15516 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms