Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MIR1322-201ENST00000638013 71 ntBASIC3.57□□□□□ -1.84
NPIPA3F8WFD2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPIPA3F8WFD2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.57□□□□□ -1.84
NPIPA3F8WFD2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPIPA3F8WFD2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPIPA3F8WFD2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 RNA5SP399-201ENST00000364003 117 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 SNORD74.4-201ENST00000364129 80 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 Y_RNA.311-201ENST00000365068 96 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 RN7SKP156-201ENST00000410308 342 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 JKAMPP1-201ENST00000413804 919 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AL451062.2-201ENST00000427515 271 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC096638.2-201ENST00000434965 711 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AL353748.1-201ENST00000440753 474 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AL133547.1-201ENST00000448546 220 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AL451050.1-201ENST00000450126 415 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 RPS20P24-201ENST00000457473 361 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 ACTR3P3-201ENST00000480448 893 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 NCOR1P1-202ENST00000486162 291 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 USP9YP5-201ENST00000511770 630 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 RN7SKP265-201ENST00000516448 223 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 RNA5SP143-201ENST00000516936 115 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 TRMT10BP1-201ENST00000519377 943 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 NBEAP1-201ENST00000554452 979 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 OR4K7P-201ENST00000580232 945 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 MAGOH2P-202ENST00000584384 429 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC097478.2-201ENST00000610572 514 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC092106.3-201ENST00000611308 722 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC006329.2-201ENST00000611491 394 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC243773.3-201ENST00000613270 256 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC039056.2-201ENST00000622261 511 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 AC040168.1-201ENST00000623594 991 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 MTND2P41-201ENST00000637599 773 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 NUP58P1-201ENST00000502546 1738 ntBASIC3.56□□□□□ -1.84
NPIPA3F8WFD2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 TIMM9P2-201ENST00000419324 266 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC092647.1-201ENST00000420654 287 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AL513174.1-201ENST00000423182 629 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 MTND2P20-201ENST00000440805 661 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 TPTE2P3-201ENST00000441562 1189 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AL133477.1-201ENST00000457472 514 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 RPL21P11-201ENST00000461458 483 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 RPL9P32-201ENST00000464118 620 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 RPS15AP17-201ENST00000470598 390 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC078817.1-201ENST00000492623 435 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 RPL5P23-201ENST00000496040 868 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC093853.1-201ENST00000515689 483 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 RNU6-583P-201ENST00000516012 92 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AC104986.1-201ENST00000517978 436 ntBASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA3F8WFD2 MTCO2P15-201ENST00000532655 656 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms