Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AL034408.1-202ENST00000636088 415 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 ZNF849P-201ENST00000594711 1566 ntBASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM49D1C9J1S8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 RNU5E-10P-201ENST00000363506 118 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC234772.1-201ENST00000377927 937 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 RNU6-932P-201ENST00000391108 106 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 PTMAP5-201ENST00000393073 333 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AP002784.2-201ENST00000397300 549 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC004022.2-201ENST00000413824 193 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC012498.1-201ENST00000424037 437 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 Z80107.1-201ENST00000436830 412 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC009969.1-201ENST00000438726 172 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 VN1R34P-201ENST00000447387 883 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 HMGN2P21-201ENST00000447764 270 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC244505.3-201ENST00000454598 187 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 CFTRP1-201ENST00000456646 183 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 RPL7P15-201ENST00000461190 712 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 RN7SL283P-201ENST00000489055 303 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 MTATP6P22-201ENST00000507369 598 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC008565.1-201ENST00000509046 885 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC023141.12-201ENST00000512399 199 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 SCARNA1-201ENST00000517138 166 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 OR8I1P-201ENST00000529291 931 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AP002812.4-201ENST00000532139 286 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 TRAV37-201ENST00000553906 342 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 RPL21P12-201ENST00000559810 515 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 ZNF971P-201ENST00000562068 1249 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 MIR3922-201ENST00000585192 84 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC093875.1-201ENST00000623688 504 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC024023.1-201ENST00000624530 922 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 AC104446.1-201ENST00000613728 1321 ntBASIC3.16□□□□□ -1.9
TRIM49D1C9J1S8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
TRIM49D1C9J1S8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.15□□□□□ -1.9
TRIM49D1C9J1S8 Z83843.1-201ENST00000604070 3685 ntBASIC3.15□□□□□ -1.9
TRIM49D1C9J1S8 AC000367.1-201ENST00000452711 1766 ntBASIC3.15□□□□□ -1.9
TRIM49D1C9J1S8 GABPAP-201ENST00000419271 1356 ntBASIC3.15□□□□□ -1.9
TRIM49D1C9J1S8 AL353743.4-201ENST00000422653 1547 ntBASIC3.15□□□□□ -1.9
TRIM49D1C9J1S8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM49D1C9J1S8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 Y_RNA.472-201ENST00000384322 102 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 RNU2-37P-201ENST00000410695 177 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC114973.1-201ENST00000429057 632 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 RPL37P1-201ENST00000432310 284 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 ARF4P4-201ENST00000439608 520 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 OR10R1P-201ENST00000441524 1141 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 MTCO1P53-201ENST00000441633 699 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 SNRPGP3-201ENST00000469405 227 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 RPS17P11-201ENST00000474297 293 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 TMED11P-201ENST00000479478 690 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC073522.1-201ENST00000483312 377 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AL035404.1-201ENST00000497982 568 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC008427.1-201ENST00000503102 655 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC026403.1-201ENST00000518938 295 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC006518.2-201ENST00000542513 940 ntBASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM49D1C9J1S8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms