Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA11Q9Y5H2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA11Q9Y5H2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA11Q9Y5H2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA11Q9Y5H2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC027287.1-201ENST00000553115 1453 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC024587.1-201ENST00000505925 2157 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 Y_RNA.152-201ENST00000363578 100 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 SMIM11P1-201ENST00000369586 178 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 MT-TC-201ENST00000387405 66 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 Z99755.1-201ENST00000414048 380 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 USMG5P1-201ENST00000425964 177 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AL590399.2-201ENST00000427536 309 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC008481.1-201ENST00000463278 396 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AF213884.1-201ENST00000488102 463 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AP001086.1-201ENST00000494882 321 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC021146.3-201ENST00000511911 260 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 OR10G5P-201ENST00000532733 358 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 GSTP1P1-201ENST00000548078 319 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 DYNLL1P4-201ENST00000549314 266 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 RPL23AP84-201ENST00000571193 464 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 RN7SL261P-201ENST00000613441 282 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 TUG1_2.1-201ENST00000614234 87 ntBASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA11Q9Y5H2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA11Q9Y5H2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA11Q9Y5H2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.9□□□□□ -1.47
PCDHGA11Q9Y5H2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA11Q9Y5H2 MAPK10-338ENST00000641647 3362 ntBASIC5.9□□□□□ -1.47
PCDHGA11Q9Y5H2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHGA11Q9Y5H2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AC109446.4-201ENST00000623235 2755 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 SNORD62.1-201ENST00000362541 86 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU6-214P-201ENST00000384130 107 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 Y_RNA.489-201ENST00000384410 101 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 MIR191-201ENST00000384873 92 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RN7SKP146-201ENST00000410242 334 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RNA5SP156-201ENST00000410250 110 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RNA5SP198-201ENST00000410376 127 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL21P109-201ENST00000422213 475 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL12P16-201ENST00000431098 498 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL23AP50-201ENST00000434149 455 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC00328-2P-201ENST00000436585 219 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 KF459542.1-201ENST00000450908 553 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AC094085.1-201ENST00000468914 584 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL23AP40-201ENST00000487630 390 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 HMGN1P16-201ENST00000508308 283 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU2-69P-201ENST00000516061 100 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AC087854.1-201ENST00000519706 414 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU4ATAC-201ENST00000580972 127 ntBASIC5.89□□□□□ -1.47
PCDHGA11Q9Y5H2 AC006254.3-201ENST00000603353 884 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms