Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
UBE2D4Q9Y2X8 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.9□□□□□ -2.11
UBE2D4Q9Y2X8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
UBE2D4Q9Y2X8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
UBE2D4Q9Y2X8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 SNORA71.3-201ENST00000362582 128 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 SNORD56.5-201ENST00000364281 72 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 RNA5SP267-201ENST00000364893 126 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 BTBD10P2-201ENST00000404779 676 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AL158156.1-201ENST00000422509 473 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC127537.2-201ENST00000439258 465 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 RPS3AP12-201ENST00000443616 753 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 UBBP3-201ENST00000445497 241 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 RAB28P3-201ENST00000448325 597 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AL109741.2-201ENST00000455561 343 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 VN1R17P-201ENST00000472048 1090 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AP000852.1-201ENST00000472460 573 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC016687.1-201ENST00000482574 353 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 RN7SL504P-201ENST00000494496 287 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 PTGES3P3-201ENST00000511479 482 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 RNU6-711P-201ENST00000517255 106 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 OR7K1P-201ENST00000546439 926 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC125611.2-201ENST00000551907 647 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC053481.3-201ENST00000577881 843 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 MIR3690-201ENST00000580266 75 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC060766.3-201ENST00000591442 263 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC006539.2-201ENST00000601729 572 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC024153.1-201ENST00000603103 365 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AL049779.4-201ENST00000604500 156 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AP000676.4-201ENST00000624659 623 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.89□□□□□ -2.11
UBE2D4Q9Y2X8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 DEFA7P-201ENST00000382676 285 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 RNU1-138P-201ENST00000384093 164 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 BX682237.1-201ENST00000415016 335 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 MTCO3P21-201ENST00000430791 643 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AC129850.1-201ENST00000436203 508 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 SRIP1-201ENST00000489235 288 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 OR5H4P-201ENST00000510851 923 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 SNORA74D-201ENST00000516404 141 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 SNORA70.24-201ENST00000517233 118 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AP002404.1-201ENST00000532005 451 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 OR8L1P-201ENST00000534005 955 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AC234775.3-201ENST00000564612 656 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AL160237.3-201ENST00000604114 1013 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 FO624990.1-201ENST00000636373 85 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AP002907.1-201ENST00000606361 1430 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 ZNF271P-202ENST00000465539 1970 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 AC109315.1-201ENST00000584143 1347 ntBASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.88□□□□□ -2.11
UBE2D4Q9Y2X8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 NACA3P-201ENST00000359690 648 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 RNU1-100P-201ENST00000365255 165 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 SNORA11.1-201ENST00000408133 129 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL024507.1-201ENST00000412741 274 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL031736.2-201ENST00000426573 787 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 NPM1P24-201ENST00000428039 894 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC006946.1-201ENST00000429106 328 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms