Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC009965.2-201ENST00000425328 970 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 RPS25P9-201ENST00000435591 252 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 RPL31P3-201ENST00000458430 332 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC092754.2-201ENST00000463506 460 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC010307.1-201ENST00000467206 836 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 NCOR1P1-202ENST00000486162 291 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 SETP14-201ENST00000497538 873 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AP001189.2-201ENST00000527320 189 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 MIR3915-201ENST00000578518 97 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC008687.2-201ENST00000597865 520 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC018714.1-201ENST00000605028 208 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AL355816.1-201ENST00000607951 118 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC008083.4-201ENST00000615076 444 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC123768.4-201ENST00000616244 701 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 AC092140.2-201ENST00000618027 521 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 MKKS-204ENST00000639674 192 ntBASIC4.07□□□□□ -1.76
SIX4Q9UIU6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX4Q9UIU6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 LINC02471-203ENST00000641941 4752 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 BDP1P-201ENST00000582658 1990 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC016716.1-201ENST00000265882 708 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 SUGT1P1-201ENST00000379514 476 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 Y_RNA.560-201ENST00000384689 102 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 RPL7P60-201ENST00000397636 735 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 TMSB4XP8-201ENST00000402089 135 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 RNA5SP39-201ENST00000411245 120 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 TMSB4XP6-201ENST00000415187 135 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC009237.2-201ENST00000421358 284 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC019178.2-201ENST00000423595 505 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 TMSB4XP1-201ENST00000424567 135 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 NPM1P24-201ENST00000428039 894 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 NANOGP6-201ENST00000429190 847 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 RPL7P31-201ENST00000450192 724 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 HMGB3P21-201ENST00000452483 547 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 RPS15AP1-201ENST00000457423 391 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC104689.1-201ENST00000473356 768 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 S100A11P1-201ENST00000477525 312 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 RNY4P37-201ENST00000516225 96 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 RNU1-45P-201ENST00000517191 141 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC244505.7-201ENST00000599675 272 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AL590229.1-201ENST00000603497 542 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 DUXAP11-201ENST00000603858 526 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC135507.1-201ENST00000607214 561 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AL354760.1-201ENST00000608357 643 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC243756.2-201ENST00000618406 463 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 AC134882.1-201ENST00000603738 1676 ntBASIC4.06□□□□□ -1.76
SIX4Q9UIU6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIX4Q9UIU6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SIX4Q9UIU6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms