Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.16□□□□□ -1.58
PPARGC1AQ9UBK2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.16□□□□□ -1.58
PPARGC1AQ9UBK2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PPARGC1AQ9UBK2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PPARGC1AQ9UBK2 AP000542.2-201ENST00000623199 6179 ntBASIC5.16□□□□□ -1.58
PPARGC1AQ9UBK2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PPARGC1AQ9UBK2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PPARGC1AQ9UBK2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
PPARGC1AQ9UBK2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.15□□□□□ -1.58
PPARGC1AQ9UBK2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PPARGC1AQ9UBK2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PPARGC1AQ9UBK2 AL049555.1-201ENST00000562834 1933 ntBASIC5.15□□□□□ -1.58
PPARGC1AQ9UBK2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PPARGC1AQ9UBK2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.15□□□□□ -1.58
PPARGC1AQ9UBK2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PPARGC1AQ9UBK2 RNU6-28P-201ENST00000362378 107 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-853P-201ENST00000364306 107 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 BTBD10P2-201ENST00000404779 676 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC127391.1-201ENST00000411737 98 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC013429.2-201ENST00000418798 781 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 RPS17P2-201ENST00000461663 408 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 RPL23AP41-201ENST00000484754 458 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 RN7SL97P-201ENST00000486780 299 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC073073.1-201ENST00000493920 463 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 FTH1P24-201ENST00000503502 462 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC025465.4-201ENST00000513422 638 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC105031.1-201ENST00000518550 476 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 RAB11AP2-201ENST00000545905 639 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 MIR4504-201ENST00000577413 92 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC073091.2-201ENST00000603205 907 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC007621.1-201ENST00000604544 437 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC016727.1-205ENST00000605437 569 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AP003117.2-201ENST00000606010 545 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AL133173.2-201ENST00000614270 90 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC015914.2-201ENST00000618167 288 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC091905.4-201ENST00000623432 202 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 MIR3662-201ENST00000637030 95 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AL592148.3-201ENST00000608771 2646 ntBASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.15□□□□□ -1.59
PPARGC1AQ9UBK2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 Y_RNA.160-201ENST00000363677 92 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 Y_RNA.813-201ENST00000364639 102 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 UBBP2-201ENST00000376781 231 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RNU1-39P-201ENST00000383897 165 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 SSXP10-201ENST00000402595 565 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AL356776.1-201ENST00000406574 447 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RBMY2QP-201ENST00000429799 1147 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC104850.1-201ENST00000435940 476 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RPL35AP21-201ENST00000437667 333 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 BTF3P6-201ENST00000448054 499 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC104073.1-201ENST00000451988 151 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RPS20P32-201ENST00000456044 356 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 MTCO2P29-201ENST00000465212 189 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RN7SL319P-201ENST00000480656 221 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 NIP7P2-201ENST00000485801 544 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RPL36AP51-201ENST00000487216 318 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RNF138P1-201ENST00000502765 546 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC140172.1-201ENST00000502928 141 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 MTND3P22-201ENST00000510932 243 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC022790.1-201ENST00000522872 204 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 OR4R3P-201ENST00000525084 838 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms