Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 USP9YP36-201ENST00000424581 829 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 MTCO1P39-201ENST00000426148 480 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 OR2B8P-201ENST00000432841 938 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC092754.2-201ENST00000463506 460 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC010627.1-201ENST00000503819 1294 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC005046.1-201ENST00000608515 625 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC107294.3-201ENST00000609211 526 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AL020991.1-201ENST00000612314 373 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC231759.1-201ENST00000616455 597 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AC138393.1-206ENST00000540997 1886 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 AL136360.1-201ENST00000503377 1900 ntBASIC2.64□□□□□ -1.99
CCDC88CQ9P219 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC88CQ9P219 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AC138915.3-201ENST00000562908 1389 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 RPL5P18-201ENST00000406671 891 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 BTF3P9-201ENST00000418784 283 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AC093716.1-201ENST00000435923 377 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 ST13P20-201ENST00000447996 1065 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AC023050.1-201ENST00000498198 304 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 SETP12-201ENST00000514068 805 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 RNA5SP76-201ENST00000516277 87 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AL355836.1-201ENST00000555951 870 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 RPL23AP92-201ENST00000603609 255 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 U3.15-201ENST00000365398 212 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 MIR181B1-201ENST00000385240 110 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 SNORD65-201ENST00000391079 73 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AL356057.3-201ENST00000402607 340 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AL138827.1-201ENST00000402666 306 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 MTCO1P52-201ENST00000433928 531 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AP002884.2-201ENST00000471647 395 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AP005205.1-201ENST00000563503 508 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 MIR3162-201ENST00000581818 82 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 TPMTP1-201ENST00000592307 737 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AL137246.1-201ENST00000607072 977 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AL451074.6-201ENST00000608512 729 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AP003485.2-201ENST00000623636 610 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 AC092159.4-201ENST00000624944 550 ntBASIC2.63□□□□□ -1.99
CCDC88CQ9P219 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
CCDC88CQ9P219 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC88CQ9P219 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC88CQ9P219 XPOTP1-201ENST00000443317 2398 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC88CQ9P219 MT-TP-201ENST00000387461 68 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 RPS4XP8-201ENST00000402039 771 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 AC244505.4-201ENST00000434905 287 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 SSXP5-201ENST00000443473 287 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 CALM1P2-201ENST00000452941 448 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 AL590639.1-201ENST00000456484 337 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 AC092451.1-201ENST00000480211 153 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 RPL23AP44-201ENST00000482216 473 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 AC103975.1-201ENST00000482506 483 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 RN7SL297P-201ENST00000483161 293 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC88CQ9P219 RNU6-347P-201ENST00000516658 105 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC88CQ9P219 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC88CQ9P219 AC109315.1-201ENST00000584143 1347 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CCDC88CQ9P219 MTCO1P8-201ENST00000416914 1523 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 AC117529.2-201ENST00000512159 2068 ntBASIC2.62□□□□□ -1.99
CCDC88CQ9P219 AL035425.3-201ENST00000564206 4996 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 FTLP6-201ENST00000355274 422 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CCDC88CQ9P219 RNA5SP68-201ENST00000363885 119 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 RNU6-304P-201ENST00000364855 107 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 YPEL5P1-201ENST00000419731 367 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AC048351.1-201ENST00000420064 602 ntBASIC2.61□□□□□ -1.99
CCDC88CQ9P219 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms