Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH9Q9HC56 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AL391994.1-201ENST00000254724 282 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC007685.1-201ENST00000329806 452 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 RNU5A-2P-201ENST00000384337 116 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 TIMM9P2-201ENST00000419324 266 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 CYP4F29P-201ENST00000420685 446 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 RPL36P19-201ENST00000430744 301 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC241584.1-201ENST00000438469 1241 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 HSFY6P-201ENST00000445573 403 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC092754.2-201ENST00000463506 460 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC104685.1-201ENST00000502445 371 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 HMGB1P28-201ENST00000507778 552 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 MIR2116-201ENST00000517221 80 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC135279.1-201ENST00000543493 504 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC090502.2-201ENST00000549267 280 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC090877.1-201ENST00000561418 344 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AL133457.1-201ENST00000564251 987 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC007224.1-201ENST00000564410 144 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC005255.1-201ENST00000593748 216 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AL451064.1-201ENST00000607718 471 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC092653.1-201ENST00000608509 531 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC084782.3-201ENST00000612282 578 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 ZYXP1-201ENST00000617638 118 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AL139089.1-201ENST00000620372 975 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 C2orf27A-204ENST00000623058 969 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC073530.2-201ENST00000623987 261 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC026634.1-201ENST00000634369 198 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH9Q9HC56 AC025125.1-201ENST00000624743 1922 ntBASIC4.03□□□□□ -1.76
PCDH9Q9HC56 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 MIR372-201ENST00000362225 67 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 RNU6-621P-201ENST00000364752 109 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 ATP5F1P4-201ENST00000397288 746 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 DSTNP4-201ENST00000399472 474 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 NIPA2P1-201ENST00000426223 976 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC004975.1-201ENST00000428733 208 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 TBCAP1-201ENST00000436520 327 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 RANP8-201ENST00000444720 713 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AL162151.2-201ENST00000448875 158 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 RPL23AP35-201ENST00000451906 501 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 NUTF2P7-201ENST00000453086 375 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC110792.1-201ENST00000491826 472 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 YPEL5P3-201ENST00000547227 352 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 MIR3915-201ENST00000578518 97 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AP005136.1-201ENST00000579765 429 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 SNORD39.3-201ENST00000584451 71 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC245297.2-201ENST00000610119 565 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC098679.5-201ENST00000624394 571 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AC107081.3-201ENST00000612715 2034 ntBASIC4.02□□□□□ -1.77
PCDH9Q9HC56 AL445523.1-201ENST00000451184 1362 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms