Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC079610.2-201ENST00000604818 690 ntBASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 ATP5A1P2-202ENST00000616464 443 ntBASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 AC091903.1-201ENST00000624322 454 ntBASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 AC022031.1-201ENST00000585985 2593 ntBASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 MTND4P21-201ENST00000453886 1357 ntBASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 AC093831.2-201ENST00000624393 3427 ntBASIC3.79□□□□□ -1.8
RPAP1Q9BWH6 OR1S2-201ENST00000302592 978 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 OR5H2-201ENST00000355273 945 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 HNRNPDP2-201ENST00000406475 478 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 RNU2-6P-201ENST00000411404 190 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AL049737.1-201ENST00000413920 1403 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC023128.2-201ENST00000420880 1223 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 MTCO3P43-201ENST00000440974 771 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 RPL23AP23-201ENST00000452590 471 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC118282.1-201ENST00000506408 765 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC119751.1-201ENST00000513357 765 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 COX6B1P6-201ENST00000522347 255 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC006023.1-201ENST00000603944 259 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 AC116312.1-201ENST00000606841 314 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 MIR7106-201ENST00000612419 65 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.78□□□□□ -1.8
RPAP1Q9BWH6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 NACA3P-201ENST00000359690 648 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 RPL21P3-201ENST00000395517 478 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 RPL5P18-201ENST00000406671 891 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 AC146507.2-201ENST00000460608 476 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 RN7SL75P-201ENST00000461926 281 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 ST13P14-201ENST00000474095 734 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 AP001086.1-201ENST00000494882 321 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 RNA5SP380-201ENST00000517190 98 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.77□□□□□ -1.81
RPAP1Q9BWH6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC025750.2-201ENST00000442609 450 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 RPL21P8-201ENST00000465083 535 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC108729.2-201ENST00000476543 840 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC022080.3-201ENST00000544433 482 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 TRAV37-201ENST00000553906 342 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 UBL5P2-201ENST00000583788 219 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC010680.4-201ENST00000605334 543 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AL354696.1-201ENST00000614652 497 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 U6.107-201ENST00000637108 79 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 AC073325.2-201ENST00000339545 159 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 RNA5SP391-201ENST00000363456 119 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 UBE2V1P15-201ENST00000407776 448 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 TATDN1P1-201ENST00000414123 891 ntBASIC3.76□□□□□ -1.81
RPAP1Q9BWH6 RPL35AP12-201ENST00000425362 338 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms