Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AL031985.3-201ENST00000565390 2449 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 SNORA70.2-201ENST00000364506 135 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 RPS3AP26-201ENST00000398259 784 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AL031679.1-201ENST00000400616 525 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 MIR320C1-201ENST00000408566 88 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 TPMTP2-201ENST00000414372 726 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 PRELID3BP10-201ENST00000431957 584 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 KATNBL1P6-201ENST00000453433 915 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC133473.1-201ENST00000455173 299 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC022034.3-201ENST00000471393 478 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC017015.1-201ENST00000477387 286 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC026402.1-201ENST00000513642 170 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 HIGD1AP3-201ENST00000515857 278 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 NDUFA5P2-201ENST00000519723 344 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 TVP23BP1-201ENST00000557500 617 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 PCMTD1P2-201ENST00000565017 355 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AP005136.1-201ENST00000579765 429 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC004223.2-201ENST00000590309 544 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 BBIP1P1-201ENST00000602999 279 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AC068137.4-201ENST00000638485 296 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 IQCB2P-201ENST00000401788 1633 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 AL022578.1-201ENST00000439330 1433 ntBASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHMP4CQ96CF2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 PABPC1P7-201ENST00000413177 1513 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AL356489.2-201ENST00000566968 3528 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 OR5P1P-201ENST00000299512 925 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AL672167.1-206ENST00000356293 943 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 RNU5F-7P-201ENST00000363696 115 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 RNU6-878P-201ENST00000384578 110 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 RPL31P1-201ENST00000398116 372 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 MIR1911-201ENST00000410783 80 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 RN7SKP167-201ENST00000411047 285 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 RPL23AP26-201ENST00000412728 464 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC012065.2-201ENST00000421295 375 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 GLRXP1-201ENST00000423261 334 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC069285.2-201ENST00000440210 275 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 HSPE1P28-201ENST00000443139 211 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 MTND1P29-201ENST00000448112 647 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 RPL30P9-201ENST00000465586 330 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 MTND4LP3-201ENST00000468320 276 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 RN7SL810P-201ENST00000493031 276 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC080014.1-201ENST00000496877 1201 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 OR2A20P-203ENST00000498397 1268 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC006499.5-201ENST00000505037 514 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC093809.1-201ENST00000509155 340 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 PARP4P3-201ENST00000510265 317 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 HIGD1AP10-201ENST00000527837 282 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC141257.3-201ENST00000572906 215 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC107214.2-201ENST00000608204 634 ntBASIC5.13□□□□□ -1.59
CHMP4CQ96CF2 AC105429.2-201ENST00000610567 517 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms