Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC023043.3-201ENST00000593113 385 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 VN1R79P-201ENST00000593540 513 ntBASIC3.84□□□□□ -1.79
VPS8Q8N3P4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS8Q8N3P4 MAPK10-322ENST00000641485 4530 ntBASIC3.83□□□□□ -1.8
VPS8Q8N3P4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS8Q8N3P4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS8Q8N3P4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS8Q8N3P4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS8Q8N3P4 AL049610.1-201ENST00000423374 372 ntBASIC3.83□□□□□ -1.8
VPS8Q8N3P4 RPL36AP6-201ENST00000435770 321 ntBASIC3.83□□□□□ -1.8
VPS8Q8N3P4 BTG3P1-201ENST00000435859 716 ntBASIC3.83□□□□□ -1.8
VPS8Q8N3P4 EIF5A2P1-201ENST00000564027 460 ntBASIC3.83□□□□□ -1.8
VPS8Q8N3P4 MTCO3P13-201ENST00000577757 781 ntBASIC3.83□□□□□ -1.8
VPS8Q8N3P4 AC061975.8-201ENST00000587058 721 ntBASIC3.83□□□□□ -1.8
VPS8Q8N3P4 DNAJC19P3-201ENST00000594491 331 ntBASIC3.83□□□□□ -1.8
VPS8Q8N3P4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS8Q8N3P4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VPS8Q8N3P4 Z73965.1-201ENST00000623412 2297 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AC138393.1-206ENST00000540997 1886 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 SNORA62.2-201ENST00000364672 152 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 SNORA36C-201ENST00000384289 132 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VPS8Q8N3P4 RNA5SP239-201ENST00000410218 129 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 RN7SKP123-201ENST00000410732 291 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AL158825.1-201ENST00000414735 521 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 MTCO1P39-201ENST00000426148 480 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 FTH1P25-201ENST00000447665 469 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS8Q8N3P4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS8Q8N3P4 RPS27AP1-201ENST00000475545 471 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS8Q8N3P4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS8Q8N3P4 MIR3124-201ENST00000582636 67 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AC010928.3-201ENST00000587712 541 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AC023813.4-201ENST00000607580 580 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AC017076.1-201ENST00000607613 578 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AC067747.1-201ENST00000608026 250 ntBASIC3.82□□□□□ -1.8
VPS8Q8N3P4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS8Q8N3P4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS8Q8N3P4 AC046144.1-201ENST00000478559 1853 ntBASIC3.81□□□□□ -1.8
VPS8Q8N3P4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 RPL21P112-201ENST00000434403 463 ntBASIC3.81□□□□□ -1.8
VPS8Q8N3P4 RPS12P2-201ENST00000439728 269 ntBASIC3.81□□□□□ -1.8
VPS8Q8N3P4 AC099063.2-201ENST00000446360 662 ntBASIC3.81□□□□□ -1.8
VPS8Q8N3P4 AC078785.3-201ENST00000476607 425 ntBASIC3.81□□□□□ -1.8
VPS8Q8N3P4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 AC017037.2-201ENST00000513850 890 ntBASIC3.81□□□□□ -1.8
VPS8Q8N3P4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 MIR4506-201ENST00000584693 77 ntBASIC3.81□□□□□ -1.8
VPS8Q8N3P4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 AC245100.2-201ENST00000454544 1679 ntBASIC3.81□□□□□ -1.8
VPS8Q8N3P4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS8Q8N3P4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AL133412.1-201ENST00000380194 2992 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AC011155.1-201ENST00000316512 456 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 RNU6-1320P-201ENST00000390838 107 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 RNU6-1269P-201ENST00000391139 107 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 RPS4XP7-201ENST00000406274 780 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AC006020.1-201ENST00000420179 1854 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 RNU6-599P-201ENST00000459383 107 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 RNU6-1193P-201ENST00000459461 107 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AC008549.1-201ENST00000512900 643 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 CD24P2-201ENST00000565486 219 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AC009159.1-201ENST00000618386 642 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AL590808.1-201ENST00000618696 141 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 RNU6-368P-201ENST00000620928 107 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 RNU6-538P-201ENST00000622329 107 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AC025034.2-201ENST00000623264 286 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 AP006437.1-201ENST00000641440 3685 ntBASIC3.8□□□□□ -1.8
VPS8Q8N3P4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS8Q8N3P4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 AC106901.1-201ENST00000425086 698 ntBASIC3.79□□□□□ -1.8
VPS8Q8N3P4 RPS27P27-201ENST00000498779 255 ntBASIC3.79□□□□□ -1.8
VPS8Q8N3P4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 HMGB1P41-201ENST00000520234 440 ntBASIC3.79□□□□□ -1.8
VPS8Q8N3P4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms