Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC146507.2-201ENST00000460608 476 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 NAP1L1P3-201ENST00000462291 880 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 PLGLA-201ENST00000465668 449 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 ST13P14-201ENST00000474095 734 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC007688.1-201ENST00000475592 759 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RNF138P1-201ENST00000502765 546 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 FCF1P8-201ENST00000510322 597 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 NPM1P41-201ENST00000512920 831 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RN7SKP18-201ENST00000516005 275 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 RN7SKP21-201ENST00000516503 220 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC113192.3-201ENST00000529152 742 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AL136520.1-202ENST00000555494 763 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC093510.2-201ENST00000562820 896 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 MTCO1P40-201ENST00000574371 625 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 BPTFP1-201ENST00000579209 492 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC022069.1-201ENST00000582910 658 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC006023.2-201ENST00000609916 167 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AP005229.2-201ENST00000609980 697 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AC091903.1-201ENST00000624322 454 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.26□□□□□ -1.89
NUDCD3Q8IVD9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-374P-201ENST00000364146 108 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 RNA5SP479-201ENST00000364858 117 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-354P-201ENST00000383862 107 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-629P-201ENST00000384061 103 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-610P-201ENST00000384264 107 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-441P-201ENST00000384545 106 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 SNORA57.1-201ENST00000391227 145 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 FO393414.1-201ENST00000428697 1184 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC002542.1-201ENST00000440683 193 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AL096829.2-201ENST00000446582 742 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 NECAP1P2-201ENST00000455668 727 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC104057.1-201ENST00000515547 497 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-1073P-201ENST00000517182 106 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC005412.1-201ENST00000580812 1049 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AP002906.1-201ENST00000603405 233 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC068831.8-201ENST00000620171 435 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC127502.3-201ENST00000636170 1206 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 MTND5P24-201ENST00000438892 1767 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 ZNF37BP-203ENST00000452306 1352 ntBASIC3.25□□□□□ -1.89
NUDCD3Q8IVD9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 U6.112-201ENST00000384129 70 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 MIR1250-201ENST00000408098 113 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 RNU2-71P-201ENST00000411395 189 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 CYCSP4-201ENST00000429682 331 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC091959.2-201ENST00000477363 321 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC011352.3-201ENST00000505162 593 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 APOOP4-201ENST00000513530 597 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 MTCO1P49-201ENST00000523429 802 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms