Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 AP001029.2-203ENST00000589795 4910 ntBASIC6.55□□□□□ -1.36
RNF20Q5VTR2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF20Q5VTR2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC090337.1-201ENST00000579651 2074 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 RBPJP2-201ENST00000618187 1444 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 RNU6-97P-201ENST00000363387 104 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 U3.12-201ENST00000364498 214 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 Y_RNA.378-201ENST00000365652 113 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 Y_RNA.618-201ENST00000410949 107 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC114482.1-201ENST00000418010 247 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 RPL12P17-201ENST00000432393 498 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 RN7SL72P-201ENST00000460697 269 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 CCDC34P1-201ENST00000507441 517 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 RNU6-566P-201ENST00000516790 107 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AP000889.2-201ENST00000532684 490 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC024224.1-201ENST00000538284 609 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AP000763.2-201ENST00000540641 163 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 MIR4424-201ENST00000585257 86 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AL592436.1-201ENST00000605135 558 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AL031666.3-201ENST00000609320 1006 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC083806.3-201ENST00000614016 455 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 CU639417.4-201ENST00000623928 207 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 CYP3A51P-201ENST00000633513 256 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 MTCO1P7-201ENST00000419523 1542 ntBASIC6.54□□□□□ -1.36
RNF20Q5VTR2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF20Q5VTR2 AC100757.1-201ENST00000616872 1835 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 HSPE1P11-201ENST00000339579 310 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 RNU6-1188P-201ENST00000363795 107 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC117470.1-201ENST00000381974 330 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 MIR558-201ENST00000384920 94 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 RNU2-22P-201ENST00000411266 212 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 OR6C66P-201ENST00000414917 930 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AKR1B10P1-201ENST00000425765 942 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC005019.1-201ENST00000436455 431 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 TXNP1-201ENST00000441872 371 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AL118520.1-201ENST00000450770 291 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AP000797.2-201ENST00000475768 606 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC005912.1-201ENST00000495392 255 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC020893.1-201ENST00000502452 580 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC018442.3-201ENST00000523025 183 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF20Q5VTR2 AP005403.1-201ENST00000579720 229 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 MIR4775-201ENST00000581168 75 ntBASIC6.53□□□□□ -1.36
RNF20Q5VTR2 MIR4660-201ENST00000583549 74 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms