Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AP003467.2-201ENST00000520175 319 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 ATP5J2P6-201ENST00000565203 266 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 MIR4277-201ENST00000578298 84 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 ZNF415P1-201ENST00000582279 1166 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 OR10AB1P-201ENST00000609613 938 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC103710.1-201ENST00000610003 901 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AL022401.1-201ENST00000619498 108 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AL022322.2-201ENST00000624072 20397 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC139713.2-214ENST00000642059 1811 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC108751.5-201ENST00000492880 1336 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 DHX9P1-201ENST00000436565 3076 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC008033.1-201ENST00000216407 1162 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 RNU6-348P-201ENST00000384386 107 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 FCF1P10-201ENST00000407590 479 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 SNORA11-201ENST00000408789 128 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 RNU4-78P-201ENST00000410940 126 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC004690.1-201ENST00000418216 328 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 ARL2BPP10-201ENST00000446487 531 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 OR9M1P-201ENST00000459641 921 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 HMGB1P25-201ENST00000468402 607 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 OR5M7P-201ENST00000526140 972 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AP003392.2-201ENST00000527269 208 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 RPL21P5-201ENST00000554662 472 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC034268.2-201ENST00000571784 482 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC136624.4-201ENST00000573044 370 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 MIR4528-201ENST00000577763 90 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC080078.2-201ENST00000603766 501 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC091805.2-201ENST00000603848 235 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AC010680.3-201ENST00000604215 520 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 Z99129.1-201ENST00000612510 255 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 AL589743.7-201ENST00000612637 233 ntBASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC144BQ3MJ40 MTND5P29-201ENST00000458676 1807 ntBASIC5.46□□□□□ -1.53
CCDC144BQ3MJ40 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.46□□□□□ -1.53
CCDC144BQ3MJ40 AC011460.1-201ENST00000636268 1834 ntBASIC5.46□□□□□ -1.53
CCDC144BQ3MJ40 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC144BQ3MJ40 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC144BQ3MJ40 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 Y_RNA.46-201ENST00000362695 102 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 RNU6-263P-201ENST00000363811 107 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 SNORD113.2-201ENST00000364166 89 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 Y_RNA.517-201ENST00000384551 106 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 RPS20P2-201ENST00000402520 389 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 RPS3AP3-201ENST00000411933 242 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 MTCYBP1-201ENST00000454315 1119 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 SNORD108-201ENST00000459332 71 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC103987.1-201ENST00000473394 348 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC113430.1-201ENST00000506872 718 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC133555.2-201ENST00000550213 292 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AL049839.1-201ENST00000556151 657 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms