Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AC124293.1-201ENST00000530034 493 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.09□□□□□ -1.91
RFX4Q33E94 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.09□□□□□ -1.91
RFX4Q33E94 SERPINE4P-201ENST00000554978 281 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 OR4H12P-201ENST00000556269 907 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 NIFKP8-201ENST00000560500 874 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.09□□□□□ -1.91
RFX4Q33E94 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AC023825.1-201ENST00000566704 1030 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AL365400.2-201ENST00000605604 902 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.09□□□□□ -1.91
RFX4Q33E94 MIR7851-201ENST00000610611 160 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RFX4Q33E94 AP000943.4-201ENST00000622912 357 ntBASIC3.09□□□□□ -1.91
RFX4Q33E94 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.09□□□□□ -1.91
RFX4Q33E94 MTND4P34-201ENST00000572715 1371 ntBASIC3.09□□□□□ -1.92
RFX4Q33E94 CR383658.2-201ENST00000547576 1525 ntBASIC3.09□□□□□ -1.92
RFX4Q33E94 RNA5SP479-201ENST00000364858 117 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFX4Q33E94 AL035405.1-201ENST00000400795 710 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AC092638.1-201ENST00000411966 1275 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFX4Q33E94 TAF13P2-201ENST00000416876 286 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 SDCBPP3-201ENST00000419629 891 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.08□□□□□ -1.92
RFX4Q33E94 PSMA2P3-201ENST00000429685 675 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 NOTCH2P1-201ENST00000443481 624 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX4Q33E94 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.08□□□□□ -1.92
RFX4Q33E94 RPS27AP1-201ENST00000475545 471 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC012181.1-201ENST00000479895 423 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AC104629.1-201ENST00000494226 508 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.08□□□□□ -1.92
RFX4Q33E94 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFX4Q33E94 MTND4LP31-201ENST00000514859 294 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AP001207.2-201ENST00000519490 539 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC104115.2-201ENST00000523026 687 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC074029.1-201ENST00000552531 1044 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 OR4T1P-201ENST00000554933 911 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC090666.1-201ENST00000578241 445 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC015917.1-201ENST00000579654 510 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AP004247.3-201ENST00000608682 624 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 MIR6798-201ENST00000612887 67 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 AP002371.2-201ENST00000624450 503 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 BX649567.1-201ENST00000642071 1134 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 AC007256.1-201ENST00000392253 2765 ntBASIC3.08□□□□□ -1.92
RFX4Q33E94 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFX4Q33E94 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RFX4Q33E94 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.08□□□□□ -1.92
RFX4Q33E94 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
RFX4Q33E94 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RFX4Q33E94 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFX4Q33E94 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RFX4Q33E94 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RFX4Q33E94 RNU5B-1-201ENST00000363286 116 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RFX4Q33E94 MCTS2P-201ENST00000394552 546 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 DSTNP4-201ENST00000399472 474 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 BMS1P22-201ENST00000414726 313 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.07□□□□□ -1.92
RFX4Q33E94 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.07□□□□□ -1.92
RFX4Q33E94 AC013262.1-201ENST00000426710 252 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.07□□□□□ -1.92
RFX4Q33E94 OR51AB1P-201ENST00000429046 620 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 AC010881.1-201ENST00000433830 235 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RFX4Q33E94 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.07□□□□□ -1.92
RFX4Q33E94 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.07□□□□□ -1.92
RFX4Q33E94 RPL7P5-201ENST00000471472 736 ntBASIC3.07□□□□□ -1.92
RFX4Q33E94 RN7SKP18-201ENST00000516005 275 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms