Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TPM4P67936 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TPM4P67936 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.27□□□□□ -1.89
TPM4P67936 RNA5SP515-201ENST00000364570 118 ntBASIC3.27□□□□□ -1.89
TPM4P67936 MIR512-1-201ENST00000384913 84 ntBASIC3.27□□□□□ -1.89
TPM4P67936 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TPM4P67936 AL590004.2-201ENST00000404787 371 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AL353678.1-201ENST00000422735 741 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 RNF19BPX-201ENST00000426224 625 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 AL162389.1-201ENST00000449233 177 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.27□□□□□ -1.89
TPM4P67936 AC103987.1-201ENST00000473394 348 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AC098799.2-201ENST00000509466 868 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.27□□□□□ -1.89
TPM4P67936 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 RNA5SP468-201ENST00000516782 93 ntBASIC3.27□□□□□ -1.89
TPM4P67936 RNU6-711P-201ENST00000517255 106 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.27□□□□□ -1.89
TPM4P67936 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.27□□□□□ -1.89
TPM4P67936 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.27□□□□□ -1.89
TPM4P67936 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.27□□□□□ -1.89
TPM4P67936 AC110792.4-201ENST00000609843 298 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AL590240.3-201ENST00000621416 943 ntBASIC3.27□□□□□ -1.89
TPM4P67936 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.27□□□□□ -1.89
TPM4P67936 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TPM4P67936 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
TPM4P67936 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
TPM4P67936 AC024341.1-201ENST00000526444 1552 ntBASIC3.26□□□□□ -1.89
TPM4P67936 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TPM4P67936 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TPM4P67936 MIR421-201ENST00000365696 85 ntBASIC3.26□□□□□ -1.89
TPM4P67936 MIR490-201ENST00000384865 128 ntBASIC3.26□□□□□ -1.89
TPM4P67936 U3.19-201ENST00000390893 196 ntBASIC3.26□□□□□ -1.89
TPM4P67936 PRRC2CP1-201ENST00000404428 159 ntBASIC3.26□□□□□ -1.89
TPM4P67936 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.26□□□□□ -1.89
TPM4P67936 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.26□□□□□ -1.89
TPM4P67936 AL445528.1-201ENST00000426330 420 ntBASIC3.26□□□□□ -1.89
TPM4P67936 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.26□□□□□ -1.89
TPM4P67936 AC140076.1-201ENST00000449897 361 ntBASIC3.26□□□□□ -1.89
TPM4P67936 AC093392.2-201ENST00000450682 337 ntBASIC3.26□□□□□ -1.89
TPM4P67936 RPL9P33-201ENST00000484311 566 ntBASIC3.26□□□□□ -1.89
TPM4P67936 AC025459.1-201ENST00000504072 156 ntBASIC3.26□□□□□ -1.89
TPM4P67936 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.26□□□□□ -1.89
TPM4P67936 SNORA9.3-201ENST00000516383 129 ntBASIC3.26□□□□□ -1.89
TPM4P67936 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.26□□□□□ -1.89
TPM4P67936 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.26□□□□□ -1.89
TPM4P67936 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.26□□□□□ -1.89
TPM4P67936 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.26□□□□□ -1.89
TPM4P67936 ELOCP31-201ENST00000540463 467 ntBASIC3.26□□□□□ -1.89
TPM4P67936 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.26□□□□□ -1.89
TPM4P67936 AC012182.1-201ENST00000570133 895 ntBASIC3.26□□□□□ -1.89
TPM4P67936 NTAN1P1-201ENST00000603150 646 ntBASIC3.26□□□□□ -1.89
TPM4P67936 AC006963.1-201ENST00000624003 1052 ntBASIC3.26□□□□□ -1.89
TPM4P67936 AC139713.2-210ENST00000641741 992 ntBASIC3.26□□□□□ -1.89
TPM4P67936 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.26□□□□□ -1.89
TPM4P67936 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TPM4P67936 ASNSP3-201ENST00000451989 1306 ntBASIC3.25□□□□□ -1.89
TPM4P67936 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TPM4P67936 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.25□□□□□ -1.89
TPM4P67936 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
TPM4P67936 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TPM4P67936 RNU6-50P-201ENST00000362356 103 ntBASIC3.25□□□□□ -1.89
TPM4P67936 SNORA9.2-201ENST00000365361 133 ntBASIC3.25□□□□□ -1.89
TPM4P67936 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM4P67936 MIR181A2-201ENST00000384863 110 ntBASIC3.25□□□□□ -1.89
TPM4P67936 AL591034.1-201ENST00000407447 340 ntBASIC3.25□□□□□ -1.89
TPM4P67936 RNU4-74P-201ENST00000411280 161 ntBASIC3.25□□□□□ -1.89
TPM4P67936 AC010385.1-201ENST00000412374 256 ntBASIC3.25□□□□□ -1.89
TPM4P67936 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.25□□□□□ -1.89
TPM4P67936 AC091286.1-201ENST00000431233 461 ntBASIC3.25□□□□□ -1.89
TPM4P67936 RPS29P6-201ENST00000438196 145 ntBASIC3.25□□□□□ -1.89
TPM4P67936 AL035407.2-201ENST00000454090 378 ntBASIC3.25□□□□□ -1.89
TPM4P67936 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TPM4P67936 SUMO1P1-201ENST00000497904 306 ntBASIC3.25□□□□□ -1.89
TPM4P67936 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM4P67936 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.25□□□□□ -1.89
TPM4P67936 RN7SKP283-201ENST00000517197 270 ntBASIC3.25□□□□□ -1.89
TPM4P67936 OR4A45P-201ENST00000529954 901 ntBASIC3.25□□□□□ -1.89
TPM4P67936 AP000857.1-201ENST00000532151 543 ntBASIC3.25□□□□□ -1.89
TPM4P67936 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.25□□□□□ -1.89
TPM4P67936 SNORD84-203ENST00000584275 78 ntBASIC3.25□□□□□ -1.89
TPM4P67936 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.25□□□□□ -1.89
TPM4P67936 BDH2P1-201ENST00000602288 736 ntBASIC3.25□□□□□ -1.89
TPM4P67936 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.25□□□□□ -1.89
TPM4P67936 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM4P67936 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM4P67936 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM4P67936 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TPM4P67936 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TPM4P67936 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TPM4P67936 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TPM4P67936 AL121972.1-201ENST00000402023 252 ntBASIC3.24□□□□□ -1.89
TPM4P67936 RPL36AP6-201ENST00000435770 321 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms