Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CLTCL1P53675 ST13P20-201ENST00000447996 1065 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 HMGN1P5-201ENST00000448591 263 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLTCL1P53675 SNORA31.1-201ENST00000515993 133 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 SNORA31.5-201ENST00000516190 133 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 CKS1BP7-201ENST00000522230 235 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.57□□□□□ -1.84
CLTCL1P53675 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.57□□□□□ -1.84
CLTCL1P53675 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLTCL1P53675 MAPK10-322ENST00000641485 4530 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 AL136964.1-201ENST00000622038 2990 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 XPOTP1-201ENST00000443317 2398 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 AC069528.2-201ENST00000624849 1991 ntBASIC3.57□□□□□ -1.84
CLTCL1P53675 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
CLTCL1P53675 RNU6-984P-201ENST00000363236 109 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 SNORD114-30-201ENST00000364448 72 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 USP9YP20-201ENST00000419224 558 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 AL139415.2-201ENST00000431968 163 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 UBE2D3P1-201ENST00000436669 444 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 AC011816.1-201ENST00000441346 546 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.56□□□□□ -1.84
CLTCL1P53675 GAPDHP27-201ENST00000447427 1020 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.56□□□□□ -1.84
CLTCL1P53675 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
CLTCL1P53675 AC098826.3-201ENST00000603823 466 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 AC009159.1-201ENST00000618386 642 ntBASIC3.56□□□□□ -1.84
CLTCL1P53675 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLTCL1P53675 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CLTCL1P53675 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CLTCL1P53675 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLTCL1P53675 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
CLTCL1P53675 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLTCL1P53675 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.55□□□□□ -1.84
CLTCL1P53675 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.55□□□□□ -1.84
CLTCL1P53675 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.55□□□□□ -1.84
CLTCL1P53675 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.55□□□□□ -1.84
CLTCL1P53675 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.55□□□□□ -1.84
CLTCL1P53675 AC007423.1-201ENST00000605009 627 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 U4.3-201ENST00000621047 82 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.55□□□□□ -1.84
CLTCL1P53675 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLTCL1P53675 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLTCL1P53675 AC066616.2-201ENST00000559334 1481 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLTCL1P53675 SNORA51.4-201ENST00000364993 124 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 SEPT7P2-202ENST00000398921 823 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 RNA5SP425-201ENST00000410336 112 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 WASF1P1-201ENST00000447560 1131 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.55□□□□□ -1.84
CLTCL1P53675 AC126182.1-201ENST00000478134 357 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 AC103975.1-201ENST00000482506 483 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.55□□□□□ -1.84
CLTCL1P53675 Y_RNA.676-201ENST00000516393 96 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.55□□□□□ -1.84
CLTCL1P53675 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.55□□□□□ -1.84
CLTCL1P53675 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.55□□□□□ -1.84
CLTCL1P53675 AC107871.2-201ENST00000612894 502 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 AC092881.1-201ENST00000638218 2733 ntBASIC3.55□□□□□ -1.84
CLTCL1P53675 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLTCL1P53675 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLTCL1P53675 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 RNU4-53P-201ENST00000410828 140 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 HMGB1P18-201ENST00000438801 619 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 AC099063.2-201ENST00000446360 662 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 AC133134.1-201ENST00000466800 359 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.54□□□□□ -1.84
CLTCL1P53675 AC108471.1-201ENST00000513977 287 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 AC034244.2-201ENST00000514668 858 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.54□□□□□ -1.84
CLTCL1P53675 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.54□□□□□ -1.84
CLTCL1P53675 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.54□□□□□ -1.84
CLTCL1P53675 AC007938.3-201ENST00000604965 623 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 MIR6733-201ENST00000635723 61 ntBASIC3.54□□□□□ -1.84
CLTCL1P53675 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.54□□□□□ -1.84
CLTCL1P53675 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CLTCL1P53675 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLTCL1P53675 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLTCL1P53675 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLTCL1P53675 MIR764-201ENST00000390811 85 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 AL162578.1-201ENST00000406202 378 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 RPS20P25-201ENST00000412447 352 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 AC005189.1-201ENST00000431286 310 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.53□□□□□ -1.84
CLTCL1P53675 CEACAMP4-201ENST00000457676 421 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.84
CLTCL1P53675 AC123904.3-201ENST00000547218 814 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 AC010928.3-201ENST00000587712 541 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 AL158827.2-201ENST00000602494 330 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 AL691447.3-201ENST00000635020 330 ntBASIC3.53□□□□□ -1.84
CLTCL1P53675 AC009487.4-201ENST00000624969 3585 ntBASIC3.53□□□□□ -1.85
CLTCL1P53675 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.52□□□□□ -1.85
CLTCL1P53675 RNA5SP129-201ENST00000410276 118 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.52□□□□□ -1.85
CLTCL1P53675 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.52□□□□□ -1.85
CLTCL1P53675 RPL23AP45-201ENST00000476406 468 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 RPL9P33-201ENST00000484311 566 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AC008565.1-201ENST00000509046 885 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AP000873.5-201ENST00000533906 236 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms