Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.79□□□□□ -1.8
PDX1P52945 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.79□□□□□ -1.8
PDX1P52945 AC087369.1-201ENST00000520775 996 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.79□□□□□ -1.8
PDX1P52945 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.79□□□□□ -1.8
PDX1P52945 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PDX1P52945 AC145350.1-201ENST00000567426 208 ntBASIC3.79□□□□□ -1.8
PDX1P52945 LARP7P2-201ENST00000575306 125 ntBASIC3.79□□□□□ -1.8
PDX1P52945 MIR4458-201ENST00000578872 75 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AC012417.1-201ENST00000582307 1039 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.79□□□□□ -1.8
PDX1P52945 AC104662.1-201ENST00000604448 511 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AP003117.2-201ENST00000606010 545 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.79□□□□□ -1.8
PDX1P52945 AC007490.1-201ENST00000624321 703 ntBASIC3.79□□□□□ -1.8
PDX1P52945 AC092184.1-201ENST00000625042 715 ntBASIC3.79□□□□□ -1.8
PDX1P52945 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDX1P52945 AL034408.1-202ENST00000636088 415 ntBASIC3.79□□□□□ -1.8
PDX1P52945 SAGE4P-201ENST00000442271 3381 ntBASIC3.79□□□□□ -1.8
PDX1P52945 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDX1P52945 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PDX1P52945 SNRPEP3-201ENST00000338402 276 ntBASIC3.78□□□□□ -1.8
PDX1P52945 RNU6-216P-201ENST00000363282 104 ntBASIC3.78□□□□□ -1.8
PDX1P52945 U1.1-201ENST00000384101 164 ntBASIC3.78□□□□□ -1.8
PDX1P52945 RPL21P17-201ENST00000397467 475 ntBASIC3.78□□□□□ -1.8
PDX1P52945 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.78□□□□□ -1.8
PDX1P52945 AC004552.1-201ENST00000419089 348 ntBASIC3.78□□□□□ -1.8
PDX1P52945 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDX1P52945 AL008629.1-201ENST00000438615 184 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.78□□□□□ -1.8
PDX1P52945 TRGVB-201ENST00000453257 471 ntBASIC3.78□□□□□ -1.8
PDX1P52945 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 MTCO3P2-201ENST00000457365 171 ntBASIC3.78□□□□□ -1.8
PDX1P52945 RPS26P3-201ENST00000470205 348 ntBASIC3.78□□□□□ -1.8
PDX1P52945 PPIAP15-201ENST00000479662 484 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC090543.2-201ENST00000483963 348 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC004057.1-201ENST00000485827 348 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.78□□□□□ -1.8
PDX1P52945 RPL7P38-201ENST00000488396 739 ntBASIC3.78□□□□□ -1.8
PDX1P52945 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.78□□□□□ -1.8
PDX1P52945 MTCYBP17-201ENST00000503579 789 ntBASIC3.78□□□□□ -1.8
PDX1P52945 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 AC006499.5-201ENST00000505037 514 ntBASIC3.78□□□□□ -1.8
PDX1P52945 HMGB1P28-201ENST00000507778 552 ntBASIC3.78□□□□□ -1.8
PDX1P52945 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PDX1P52945 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.78□□□□□ -1.8
PDX1P52945 HNRNPKP5-201ENST00000515300 253 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC104057.1-201ENST00000515547 497 ntBASIC3.78□□□□□ -1.8
PDX1P52945 SNORA3.4-201ENST00000515969 96 ntBASIC3.78□□□□□ -1.8
PDX1P52945 RN7SKP234-201ENST00000517173 224 ntBASIC3.78□□□□□ -1.8
PDX1P52945 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.78□□□□□ -1.8
PDX1P52945 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.78□□□□□ -1.8
PDX1P52945 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.78□□□□□ -1.8
PDX1P52945 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.78□□□□□ -1.8
PDX1P52945 NIFKP6-201ENST00000598115 845 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC021171.1-201ENST00000603137 706 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC103881.1-201ENST00000603476 538 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AL031281.1-201ENST00000604049 488 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC009220.3-201ENST00000604318 586 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC007179.3-201ENST00000604976 235 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 AC005344.1-201ENST00000613391 459 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC068722.2-201ENST00000618734 544 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC092650.2-201ENST00000619984 902 ntBASIC3.78□□□□□ -1.8
PDX1P52945 AC067852.7-201ENST00000623270 535 ntBASIC3.78□□□□□ -1.8
PDX1P52945 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.78□□□□□ -1.8
PDX1P52945 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDX1P52945 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDX1P52945 AL139811.1-201ENST00000424779 2299 ntBASIC3.78□□□□□ -1.8
PDX1P52945 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDX1P52945 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PDX1P52945 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDX1P52945 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDX1P52945 AP001486.2-201ENST00000561652 5113 ntBASIC3.77□□□□□ -1.81
PDX1P52945 AC011978.2-201ENST00000569835 2054 ntBASIC3.77□□□□□ -1.81
PDX1P52945 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDX1P52945 MIR506-201ENST00000384998 124 ntBASIC3.77□□□□□ -1.81
PDX1P52945 AC007066.1-201ENST00000392902 381 ntBASIC3.77□□□□□ -1.81
PDX1P52945 RPL23AP29-201ENST00000397284 453 ntBASIC3.77□□□□□ -1.81
PDX1P52945 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDX1P52945 HSPD1P16-201ENST00000402302 394 ntBASIC3.77□□□□□ -1.81
PDX1P52945 BTBD10P2-201ENST00000404779 676 ntBASIC3.77□□□□□ -1.81
PDX1P52945 JKAMPP1-201ENST00000413804 919 ntBASIC3.77□□□□□ -1.81
PDX1P52945 AC107081.1-201ENST00000414975 361 ntBASIC3.77□□□□□ -1.81
PDX1P52945 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.77□□□□□ -1.81
PDX1P52945 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.77□□□□□ -1.81
PDX1P52945 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.77□□□□□ -1.81
PDX1P52945 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.77□□□□□ -1.81
PDX1P52945 AL162388.1-201ENST00000450912 352 ntBASIC3.77□□□□□ -1.81
PDX1P52945 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.77□□□□□ -1.81
PDX1P52945 AC092757.1-201ENST00000467293 467 ntBASIC3.77□□□□□ -1.81
PDX1P52945 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.77□□□□□ -1.81
PDX1P52945 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms