Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD4P46934 RPS6P12-201ENST00000432491 726 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD4P46934 AC234064.1-201ENST00000436312 247 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.86□□□□□ -1.79
NEDD4P46934 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD4P46934 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD4P46934 BX510359.1-201ENST00000456973 237 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.86□□□□□ -1.79
NEDD4P46934 AC108729.1-201ENST00000487812 947 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD4P46934 AC093752.1-206ENST00000511823 336 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 RNU1-143P-201ENST00000516296 146 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD4P46934 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD4P46934 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD4P46934 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD4P46934 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD4P46934 MTCYBP23-201ENST00000558717 1102 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.86□□□□□ -1.79
NEDD4P46934 MIR4644-201ENST00000579929 84 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 NF1P5-201ENST00000588287 448 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AL606834.2-201ENST00000602954 668 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AL159169.3-201ENST00000608871 561 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 U1.23-201ENST00000610293 146 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 PART1_2.1-201ENST00000612397 250 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AC100793.4-201ENST00000613683 429 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 RNU1-68P-201ENST00000615382 146 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 U1.39-201ENST00000621562 146 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD4P46934 AC068787.1-201ENST00000623908 691 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD4P46934 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
NEDD4P46934 SGO1P1-201ENST00000603525 1447 ntBASIC3.86□□□□□ -1.79
NEDD4P46934 AC114546.3-201ENST00000623582 1734 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD4P46934 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
NEDD4P46934 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
NEDD4P46934 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD4P46934 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NEDD4P46934 RNU1-75P-201ENST00000347264 129 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 RNU6-224P-201ENST00000384055 107 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 MIR3074-201ENST00000384885 81 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 MIR16-1-201ENST00000385271 89 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 Y_RNA.578-201ENST00000390903 88 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NEDD4P46934 AC027644.1-201ENST00000419595 298 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD4P46934 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD4P46934 AL031736.2-201ENST00000426573 787 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 BX890604.2-201ENST00000427883 474 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.85□□□□□ -1.79
NEDD4P46934 AC006539.3-201ENST00000454258 129 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC087312.1-201ENST00000471411 480 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC010683.1-201ENST00000473673 378 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD4P46934 AC015724.1-201ENST00000478577 156 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD4P46934 HMGB1P21-201ENST00000502313 581 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC110760.3-202ENST00000515177 371 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.85□□□□□ -1.79
NEDD4P46934 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD4P46934 OR4A2P-201ENST00000527276 913 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.85□□□□□ -1.79
NEDD4P46934 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.85□□□□□ -1.79
NEDD4P46934 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD4P46934 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD4P46934 AC135001.1-201ENST00000544546 283 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD4P46934 NIFKP8-201ENST00000560500 874 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.85□□□□□ -1.79
NEDD4P46934 AL049838.1-201ENST00000563647 981 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 MIR4716-201ENST00000579628 84 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 MIR4666A-201ENST00000580160 79 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 MIR2682-201ENST00000580305 110 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD4P46934 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.85□□□□□ -1.79
NEDD4P46934 AP004247.3-201ENST00000608682 624 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC096577.2-201ENST00000611455 153 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 uc_338.1-201ENST00000612113 180 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 AC123767.1-202ENST00000620407 817 ntBASIC3.85□□□□□ -1.79
NEDD4P46934 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.85□□□□□ -1.79
NEDD4P46934 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.85□□□□□ -1.79
NEDD4P46934 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NEDD4P46934 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NEDD4P46934 PNPT1P2-201ENST00000456768 2050 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NEDD4P46934 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD4P46934 ASNSP1-201ENST00000518311 1939 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.84□□□□□ -1.79
NEDD4P46934 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
NEDD4P46934 RNU4-51P-201ENST00000364206 140 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.84□□□□□ -1.79
NEDD4P46934 TMSB4XP8-201ENST00000402089 135 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 MIR1183-201ENST00000408856 89 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 RNA5SP293-201ENST00000410527 113 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 OR51A3P-201ENST00000413596 924 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 MTATP6P20-201ENST00000414147 562 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms