Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MIR1264-201ENST00000616374 69 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AC007318.2-201ENST00000620999 243 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AL356490.1-201ENST00000623079 479 ntBASIC3.3□□□□□ -1.88
TNFSF9P41273 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFSF9P41273 MTCO1P24-201ENST00000515438 1558 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AF127577.6-201ENST00000623352 2191 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 RIOK3P1-201ENST00000418778 1528 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.29□□□□□ -1.88
TNFSF9P41273 MTND4P8-201ENST00000514997 1362 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TNFSF9P41273 RNA5SP189-201ENST00000364920 115 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AC092745.2-202ENST00000411880 369 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFSF9P41273 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFSF9P41273 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFSF9P41273 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFSF9P41273 AL691517.1-201ENST00000440833 1235 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AL513321.1-201ENST00000441175 761 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AC007000.2-201ENST00000442564 487 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 RPS27P5-201ENST00000444247 244 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 HMGB3P6-201ENST00000444896 598 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 RPL37P4-201ENST00000448908 268 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AC233982.1-201ENST00000451247 436 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AL513343.1-201ENST00000451818 792 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFSF9P41273 TMEM248P1-201ENST00000510579 951 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AC083923.1-201ENST00000523708 376 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 OR4C2P-201ENST00000530855 1064 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 CR383656.14-201ENST00000551951 406 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFSF9P41273 AC233266.2-201ENST00000567067 528 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AC009101.1-201ENST00000568135 242 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 LARP7P3-201ENST00000579888 337 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.29□□□□□ -1.88
TNFSF9P41273 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFSF9P41273 AC009948.4-201ENST00000604692 675 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 STMN1P1-201ENST00000617809 440 ntBASIC3.29□□□□□ -1.88
TNFSF9P41273 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TNFSF9P41273 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TNFSF9P41273 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TNFSF9P41273 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFSF9P41273 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TNFSF9P41273 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TNFSF9P41273 OR5T3-201ENST00000303059 1023 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TNFSF9P41273 SNORA31-201ENST00000362607 130 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TNFSF9P41273 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFSF9P41273 RPL7P8-201ENST00000411964 730 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFSF9P41273 COTL1P1-201ENST00000422309 375 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 RPL31P12-201ENST00000422587 358 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 RPL35AP12-201ENST00000425362 338 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF9P41273 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.28□□□□□ -1.88
TNFSF9P41273 AC005189.1-201ENST00000431286 310 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFSF9P41273 RPS3AP14-201ENST00000483907 780 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AC011825.1-201ENST00000484967 388 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF9P41273 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TNFSF9P41273 AC016065.2-201ENST00000514530 444 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 RNU6-1231P-201ENST00000517185 103 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF9P41273 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.28□□□□□ -1.88
TNFSF9P41273 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TNFSF9P41273 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFSF9P41273 AC022080.3-201ENST00000544433 482 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF9P41273 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFSF9P41273 AC027104.1-201ENST00000563702 681 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFSF9P41273 AC091488.1-201ENST00000604239 660 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AL009028.1-201ENST00000604895 802 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AC018926.3-201ENST00000618841 406 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AC017104.5-201ENST00000637647 639 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AC139713.2-210ENST00000641741 992 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 AC066616.2-201ENST00000559334 1481 ntBASIC3.28□□□□□ -1.88
TNFSF9P41273 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
TNFSF9P41273 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TNFSF9P41273 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF9P41273 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.27□□□□□ -1.89
TNFSF9P41273 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TNFSF9P41273 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF9P41273 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TNFSF9P41273 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 RNU6-1005P-201ENST00000384519 107 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 SNORA44-201ENST00000384584 132 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TNFSF9P41273 DSTNP4-201ENST00000399472 474 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 RPL5P18-201ENST00000406671 891 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AC073264.1-201ENST00000411508 416 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF9P41273 AC005517.2-201ENST00000424673 553 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF9P41273 HMGB1P45-201ENST00000435986 653 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF9P41273 AL136097.1-201ENST00000456945 913 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms