Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ZNF37BP-203ENST00000452306 1352 ntBASIC3.29□□□□□ -1.88
RORAP35398 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
RORAP35398 RNA5SP235-201ENST00000365411 114 ntBASIC3.29□□□□□ -1.88
RORAP35398 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RORAP35398 AC019070.1-201ENST00000415008 1024 ntBASIC3.29□□□□□ -1.88
RORAP35398 AC005300.1-201ENST00000428401 373 ntBASIC3.29□□□□□ -1.88
RORAP35398 RPL17P35-201ENST00000432217 549 ntBASIC3.29□□□□□ -1.88
RORAP35398 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.29□□□□□ -1.88
RORAP35398 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.29□□□□□ -1.88
RORAP35398 RAB11AP1-201ENST00000442978 646 ntBASIC3.29□□□□□ -1.88
RORAP35398 ARPC3P2-201ENST00000457786 533 ntBASIC3.29□□□□□ -1.88
RORAP35398 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.29□□□□□ -1.88
RORAP35398 AC078857.1-201ENST00000469870 667 ntBASIC3.29□□□□□ -1.88
RORAP35398 AC084357.1-201ENST00000473404 255 ntBASIC3.29□□□□□ -1.88
RORAP35398 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RORAP35398 RPS27P23-201ENST00000487608 251 ntBASIC3.29□□□□□ -1.88
RORAP35398 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
RORAP35398 IGKV2-26-201ENST00000518305 343 ntBASIC3.29□□□□□ -1.88
RORAP35398 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.29□□□□□ -1.88
RORAP35398 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 AC011611.1-201ENST00000552179 197 ntBASIC3.29□□□□□ -1.88
RORAP35398 OR4T1P-201ENST00000554933 911 ntBASIC3.29□□□□□ -1.88
RORAP35398 AL845331.3-202ENST00000562856 261 ntBASIC3.29□□□□□ -1.88
RORAP35398 MIR4504-201ENST00000577413 92 ntBASIC3.29□□□□□ -1.88
RORAP35398 RN7SL622P-201ENST00000585292 275 ntBASIC3.29□□□□□ -1.88
RORAP35398 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
RORAP35398 AL365400.2-201ENST00000605604 902 ntBASIC3.29□□□□□ -1.88
RORAP35398 AC021851.1-201ENST00000608537 1082 ntBASIC3.29□□□□□ -1.88
RORAP35398 AC107294.3-201ENST00000609211 526 ntBASIC3.29□□□□□ -1.88
RORAP35398 AC245100.7-201ENST00000609678 442 ntBASIC3.29□□□□□ -1.88
RORAP35398 AL162574.2-201ENST00000614618 657 ntBASIC3.29□□□□□ -1.88
RORAP35398 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 AC091953.5-201ENST00000622919 233 ntBASIC3.29□□□□□ -1.88
RORAP35398 AL109659.3-201ENST00000624985 950 ntBASIC3.29□□□□□ -1.88
RORAP35398 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RORAP35398 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RORAP35398 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RORAP35398 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
RORAP35398 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.28□□□□□ -1.88
RORAP35398 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RORAP35398 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RORAP35398 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
RORAP35398 RNA5SP120-201ENST00000410900 112 ntBASIC3.28□□□□□ -1.88
RORAP35398 MTND4P22-201ENST00000413116 1169 ntBASIC3.28□□□□□ -1.88
RORAP35398 AC008173.1-201ENST00000418901 264 ntBASIC3.28□□□□□ -1.88
RORAP35398 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.28□□□□□ -1.88
RORAP35398 AL513175.1-201ENST00000431492 780 ntBASIC3.28□□□□□ -1.88
RORAP35398 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.28□□□□□ -1.88
RORAP35398 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.28□□□□□ -1.88
RORAP35398 AC092170.1-201ENST00000440211 356 ntBASIC3.28□□□□□ -1.88
RORAP35398 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.28□□□□□ -1.88
RORAP35398 RPL7P55-201ENST00000450522 746 ntBASIC3.28□□□□□ -1.88
RORAP35398 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RORAP35398 BX510359.1-201ENST00000456973 237 ntBASIC3.28□□□□□ -1.88
RORAP35398 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.28□□□□□ -1.88
RORAP35398 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
RORAP35398 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.28□□□□□ -1.88
RORAP35398 RPS4XP22-201ENST00000480755 780 ntBASIC3.28□□□□□ -1.88
RORAP35398 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.28□□□□□ -1.88
RORAP35398 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
RORAP35398 SNORA74D-201ENST00000516404 141 ntBASIC3.28□□□□□ -1.88
RORAP35398 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.28□□□□□ -1.88
RORAP35398 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.28□□□□□ -1.88
RORAP35398 OR5AP1P-201ENST00000529730 940 ntBASIC3.28□□□□□ -1.88
RORAP35398 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.28□□□□□ -1.88
RORAP35398 AC107954.1-201ENST00000565906 727 ntBASIC3.28□□□□□ -1.88
RORAP35398 AC095057.3-201ENST00000567102 1157 ntBASIC3.28□□□□□ -1.88
RORAP35398 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
RORAP35398 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.28□□□□□ -1.88
RORAP35398 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.28□□□□□ -1.88
RORAP35398 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.28□□□□□ -1.88
RORAP35398 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RORAP35398 AC132825.7-201ENST00000638744 335 ntBASIC3.28□□□□□ -1.88
RORAP35398 SAGE4P-201ENST00000442271 3381 ntBASIC3.28□□□□□ -1.88
RORAP35398 MTND5P28-201ENST00000438005 1594 ntBASIC3.28□□□□□ -1.88
RORAP35398 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RORAP35398 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RORAP35398 AC118273.1-201ENST00000525324 3006 ntBASIC3.27□□□□□ -1.89
RORAP35398 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
RORAP35398 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.27□□□□□ -1.89
RORAP35398 AL512283.1-201ENST00000606756 1384 ntBASIC3.27□□□□□ -1.89
RORAP35398 AL645937.1-201ENST00000641739 1652 ntBASIC3.27□□□□□ -1.89
RORAP35398 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.27□□□□□ -1.89
RORAP35398 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
RORAP35398 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.27□□□□□ -1.89
RORAP35398 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 MIR16-2-201ENST00000362117 81 ntBASIC3.27□□□□□ -1.89
RORAP35398 RNU6-1243P-201ENST00000364028 107 ntBASIC3.27□□□□□ -1.89
RORAP35398 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
RORAP35398 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
RORAP35398 MIR483-201ENST00000385070 76 ntBASIC3.27□□□□□ -1.89
RORAP35398 RNU6-837P-201ENST00000391056 108 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms