Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 PTP4A1P6-201ENST00000531034 478 ntBASIC4.47□□□□□ -1.69
CIITAP33076 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.47□□□□□ -1.69
CIITAP33076 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.47□□□□□ -1.69
CIITAP33076 TRAV15-201ENST00000556680 249 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.47□□□□□ -1.69
CIITAP33076 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.47□□□□□ -1.69
CIITAP33076 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.47□□□□□ -1.69
CIITAP33076 AL031985.2-201ENST00000600955 480 ntBASIC4.47□□□□□ -1.69
CIITAP33076 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.47□□□□□ -1.69
CIITAP33076 DUXAP11-201ENST00000603858 526 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC010680.4-201ENST00000605334 543 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC112220.3-201ENST00000605502 502 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC012603.1-201ENST00000606424 528 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.47□□□□□ -1.69
CIITAP33076 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.47□□□□□ -1.69
CIITAP33076 AC013562.2-201ENST00000611632 603 ntBASIC4.47□□□□□ -1.69
CIITAP33076 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CIITAP33076 MKKS-204ENST00000639674 192 ntBASIC4.47□□□□□ -1.69
CIITAP33076 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CIITAP33076 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CIITAP33076 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.47□□□□□ -1.69
CIITAP33076 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CIITAP33076 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.47□□□□□ -1.69
CIITAP33076 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CIITAP33076 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.47□□□□□ -1.69
CIITAP33076 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CIITAP33076 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.46□□□□□ -1.69
CIITAP33076 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
CIITAP33076 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
CIITAP33076 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CIITAP33076 AC016588.2-201ENST00000632484 3021 ntBASIC4.46□□□□□ -1.69
CIITAP33076 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 ZNF833P-201ENST00000424938 1494 ntBASIC4.46□□□□□ -1.7
CIITAP33076 RNU6-500P-201ENST00000362349 107 ntBASIC4.46□□□□□ -1.7
CIITAP33076 RNU6-623P-201ENST00000363143 105 ntBASIC4.46□□□□□ -1.7
CIITAP33076 RNU6-1066P-201ENST00000363573 105 ntBASIC4.46□□□□□ -1.7
CIITAP33076 Y_RNA.194-201ENST00000363985 102 ntBASIC4.46□□□□□ -1.7
CIITAP33076 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 MIR513A2-201ENST00000385249 127 ntBASIC4.46□□□□□ -1.7
CIITAP33076 TAF9BP1-201ENST00000396646 746 ntBASIC4.46□□□□□ -1.7
CIITAP33076 AL133264.1-201ENST00000407157 562 ntBASIC4.46□□□□□ -1.7
CIITAP33076 RPL23AP47-201ENST00000408017 460 ntBASIC4.46□□□□□ -1.7
CIITAP33076 RNU6-920P-201ENST00000410926 92 ntBASIC4.46□□□□□ -1.7
CIITAP33076 BOLA3P4-201ENST00000418151 400 ntBASIC4.46□□□□□ -1.7
CIITAP33076 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 AC011742.1-201ENST00000431448 434 ntBASIC4.46□□□□□ -1.7
CIITAP33076 HMGB1P37-201ENST00000439613 609 ntBASIC4.46□□□□□ -1.7
CIITAP33076 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.46□□□□□ -1.7
CIITAP33076 RPS26P56-201ENST00000444468 240 ntBASIC4.46□□□□□ -1.7
CIITAP33076 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.46□□□□□ -1.7
CIITAP33076 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.46□□□□□ -1.7
CIITAP33076 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
CIITAP33076 MTND1P16-201ENST00000465177 898 ntBASIC4.46□□□□□ -1.7
CIITAP33076 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.46□□□□□ -1.7
CIITAP33076 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
CIITAP33076 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.46□□□□□ -1.7
CIITAP33076 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.46□□□□□ -1.7
CIITAP33076 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.46□□□□□ -1.7
CIITAP33076 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.46□□□□□ -1.7
CIITAP33076 AC092851.1-201ENST00000535964 478 ntBASIC4.46□□□□□ -1.7
CIITAP33076 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.46□□□□□ -1.7
CIITAP33076 CENPUP2-201ENST00000555897 1186 ntBASIC4.46□□□□□ -1.7
CIITAP33076 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.46□□□□□ -1.7
CIITAP33076 ACTR3BP3-201ENST00000565577 979 ntBASIC4.46□□□□□ -1.7
CIITAP33076 AC120057.2-201ENST00000571520 271 ntBASIC4.46□□□□□ -1.7
CIITAP33076 AC105429.2-201ENST00000610567 517 ntBASIC4.46□□□□□ -1.7
CIITAP33076 FAM157B-203ENST00000639350 358 ntBASIC4.46□□□□□ -1.7
CIITAP33076 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.46□□□□□ -1.7
CIITAP33076 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CIITAP33076 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CIITAP33076 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.46□□□□□ -1.7
CIITAP33076 AC092104.1-201ENST00000497346 1441 ntBASIC4.46□□□□□ -1.7
CIITAP33076 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CIITAP33076 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CIITAP33076 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CIITAP33076 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CIITAP33076 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CIITAP33076 AP002001.2-201ENST00000529025 1469 ntBASIC4.45□□□□□ -1.7
CIITAP33076 MTND4P5-201ENST00000435821 1374 ntBASIC4.45□□□□□ -1.7
CIITAP33076 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CIITAP33076 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CIITAP33076 Y_RNA.505-201ENST00000384489 102 ntBASIC4.45□□□□□ -1.7
CIITAP33076 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.45□□□□□ -1.7
CIITAP33076 FCF1P2-201ENST00000415284 583 ntBASIC4.45□□□□□ -1.7
CIITAP33076 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 RPL31P45-201ENST00000419532 356 ntBASIC4.45□□□□□ -1.7
CIITAP33076 Z97055.1-201ENST00000419730 712 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 ELOCP18-201ENST00000434209 337 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC096638.2-201ENST00000434965 711 ntBASIC4.45□□□□□ -1.7
CIITAP33076 RPS25P9-201ENST00000435591 252 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms