Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.28□□□□□ -1.72
BDNFP23560 AL356131.1-201ENST00000405826 414 ntBASIC4.28□□□□□ -1.72
BDNFP23560 YPEL5P1-201ENST00000419731 367 ntBASIC4.28□□□□□ -1.72
BDNFP23560 BEND7P1-201ENST00000422058 457 ntBASIC4.28□□□□□ -1.72
BDNFP23560 MTCO2P5-201ENST00000422621 426 ntBASIC4.28□□□□□ -1.72
BDNFP23560 RPL7P44-201ENST00000424827 742 ntBASIC4.28□□□□□ -1.72
BDNFP23560 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.28□□□□□ -1.72
BDNFP23560 MTCO1P53-201ENST00000441633 699 ntBASIC4.28□□□□□ -1.72
BDNFP23560 RRM2P4-201ENST00000441721 562 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.28□□□□□ -1.72
BDNFP23560 AC007327.1-201ENST00000447461 264 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.28□□□□□ -1.72
BDNFP23560 RPS11P1-201ENST00000451072 473 ntBASIC4.28□□□□□ -1.72
BDNFP23560 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.28□□□□□ -1.72
BDNFP23560 AL133477.1-201ENST00000457472 514 ntBASIC4.28□□□□□ -1.72
BDNFP23560 RN7SL330P-201ENST00000469709 307 ntBASIC4.28□□□□□ -1.72
BDNFP23560 SETP14-201ENST00000497538 873 ntBASIC4.28□□□□□ -1.72
BDNFP23560 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.28□□□□□ -1.72
BDNFP23560 HMGB1P28-201ENST00000507778 552 ntBASIC4.28□□□□□ -1.72
BDNFP23560 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.28□□□□□ -1.72
BDNFP23560 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.28□□□□□ -1.72
BDNFP23560 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.28□□□□□ -1.72
BDNFP23560 AC053481.4-201ENST00000583164 216 ntBASIC4.28□□□□□ -1.72
BDNFP23560 MAGOH2P-202ENST00000584384 429 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AC022916.3-201ENST00000592961 742 ntBASIC4.28□□□□□ -1.72
BDNFP23560 BDH2P1-201ENST00000602288 736 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AC008638.3-201ENST00000603341 463 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AL365503.1-201ENST00000605247 905 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AL109618.2-201ENST00000605527 211 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AC012443.1-201ENST00000605605 231 ntBASIC4.28□□□□□ -1.72
BDNFP23560 MIR432-201ENST00000606207 94 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AP002826.1-201ENST00000608835 315 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AC068831.7-201ENST00000616954 363 ntBASIC4.28□□□□□ -1.72
BDNFP23560 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
BDNFP23560 MIR6500-201ENST00000622700 86 ntBASIC4.28□□□□□ -1.72
BDNFP23560 AC005539.1-201ENST00000443768 1479 ntBASIC4.28□□□□□ -1.72
BDNFP23560 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
BDNFP23560 AC016588.2-201ENST00000632484 3021 ntBASIC4.28□□□□□ -1.72
BDNFP23560 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BDNFP23560 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BDNFP23560 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.28□□□□□ -1.72
BDNFP23560 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
BDNFP23560 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.28□□□□□ -1.73
BDNFP23560 CUL1P1-201ENST00000509510 2425 ntBASIC4.27□□□□□ -1.73
BDNFP23560 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 AL079343.1-201ENST00000572358 1771 ntBASIC4.27□□□□□ -1.73
BDNFP23560 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
BDNFP23560 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 AC109315.1-201ENST00000584143 1347 ntBASIC4.27□□□□□ -1.73
BDNFP23560 ZNF807-201ENST00000328088 1707 ntBASIC4.27□□□□□ -1.73
BDNFP23560 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.27□□□□□ -1.73
BDNFP23560 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.27□□□□□ -1.73
BDNFP23560 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
BDNFP23560 NACA3P-201ENST00000359690 648 ntBASIC4.27□□□□□ -1.73
BDNFP23560 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
BDNFP23560 RNU6-413P-201ENST00000384115 107 ntBASIC4.27□□□□□ -1.73
BDNFP23560 SNORD116-12-201ENST00000384468 92 ntBASIC4.27□□□□□ -1.73
BDNFP23560 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 AL136372.1-201ENST00000403060 228 ntBASIC4.27□□□□□ -1.73
BDNFP23560 HMGB1P17-201ENST00000403495 628 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AL590084.1-201ENST00000407885 387 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.27□□□□□ -1.73
BDNFP23560 AL449283.1-202ENST00000418249 604 ntBASIC4.27□□□□□ -1.73
BDNFP23560 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.27□□□□□ -1.73
BDNFP23560 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.27□□□□□ -1.73
BDNFP23560 ARF4P2-201ENST00000430209 526 ntBASIC4.27□□□□□ -1.73
BDNFP23560 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
BDNFP23560 RABEPKP1-201ENST00000440529 1026 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AL136097.1-201ENST00000456945 913 ntBASIC4.27□□□□□ -1.73
BDNFP23560 snoU109.3-201ENST00000459477 145 ntBASIC4.27□□□□□ -1.73
BDNFP23560 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 VN1R105P-201ENST00000486595 910 ntBASIC4.27□□□□□ -1.73
BDNFP23560 FAM172BP-201ENST00000487497 1089 ntBASIC4.27□□□□□ -1.73
BDNFP23560 RPS4XP15-201ENST00000489210 795 ntBASIC4.27□□□□□ -1.73
BDNFP23560 VN1R104P-201ENST00000505115 1009 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.27□□□□□ -1.73
BDNFP23560 AC010460.1-201ENST00000507087 466 ntBASIC4.27□□□□□ -1.73
BDNFP23560 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 AC103783.1-201ENST00000520506 373 ntBASIC4.27□□□□□ -1.73
BDNFP23560 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BDNFP23560 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.27□□□□□ -1.73
BDNFP23560 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.27□□□□□ -1.73
BDNFP23560 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.27□□□□□ -1.73
BDNFP23560 AC120057.2-201ENST00000571520 271 ntBASIC4.27□□□□□ -1.73
BDNFP23560 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.27□□□□□ -1.73
BDNFP23560 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.27□□□□□ -1.73
BDNFP23560 BNIP3P26-201ENST00000600827 554 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AL606490.9-201ENST00000603331 271 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AC006254.3-201ENST00000603353 884 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.27□□□□□ -1.73
BDNFP23560 AL031666.3-201ENST00000609320 1006 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AC025588.4-201ENST00000615802 908 ntBASIC4.27□□□□□ -1.73
BDNFP23560 AC006111.3-201ENST00000622137 383 ntBASIC4.27□□□□□ -1.73
BDNFP23560 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.27□□□□□ -1.73
BDNFP23560 LINC02211-204ENST00000642024 1070 ntBASIC4.27□□□□□ -1.73
BDNFP23560 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms