Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.21□□□□□ -1.74
CFTRP13569 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.21□□□□□ -1.74
CFTRP13569 RPL23AP84-201ENST00000571193 464 ntBASIC4.21□□□□□ -1.74
CFTRP13569 AC022884.3-201ENST00000579571 248 ntBASIC4.21□□□□□ -1.74
CFTRP13569 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CFTRP13569 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
CFTRP13569 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.2□□□□□ -1.74
CFTRP13569 AL512633.1-201ENST00000399931 655 ntBASIC4.2□□□□□ -1.74
CFTRP13569 BTG3P1-201ENST00000435859 716 ntBASIC4.2□□□□□ -1.74
CFTRP13569 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.2□□□□□ -1.74
CFTRP13569 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.2□□□□□ -1.74
CFTRP13569 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CFTRP13569 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.2□□□□□ -1.74
CFTRP13569 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.2□□□□□ -1.74
CFTRP13569 AADACP1-206ENST00000561502 1193 ntBASIC4.2□□□□□ -1.74
CFTRP13569 AC026464.5-201ENST00000562497 722 ntBASIC4.2□□□□□ -1.74
CFTRP13569 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CFTRP13569 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CFTRP13569 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CFTRP13569 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CFTRP13569 RNU6-249P-201ENST00000363016 102 ntBASIC4.19□□□□□ -1.74
CFTRP13569 AL355379.1-201ENST00000405542 640 ntBASIC4.19□□□□□ -1.74
CFTRP13569 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.19□□□□□ -1.74
CFTRP13569 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.19□□□□□ -1.74
CFTRP13569 ST13P20-201ENST00000447996 1065 ntBASIC4.19□□□□□ -1.74
CFTRP13569 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.19□□□□□ -1.74
CFTRP13569 AC133473.1-201ENST00000455173 299 ntBASIC4.19□□□□□ -1.74
CFTRP13569 HMGB1P25-201ENST00000468402 607 ntBASIC4.19□□□□□ -1.74
CFTRP13569 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.19□□□□□ -1.74
CFTRP13569 RNA5SP458-201ENST00000516188 119 ntBASIC4.19□□□□□ -1.74
CFTRP13569 OR4A45P-201ENST00000529954 901 ntBASIC4.19□□□□□ -1.74
CFTRP13569 AP001317.1-201ENST00000531194 960 ntBASIC4.19□□□□□ -1.74
CFTRP13569 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.19□□□□□ -1.74
CFTRP13569 NRBF2P1-201ENST00000587407 859 ntBASIC4.19□□□□□ -1.74
CFTRP13569 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC4.19□□□□□ -1.74
CFTRP13569 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CFTRP13569 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CFTRP13569 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CFTRP13569 AC104454.1-201ENST00000421341 1401 ntBASIC4.18□□□□□ -1.74
CFTRP13569 Y_RNA.238-201ENST00000364441 102 ntBASIC4.18□□□□□ -1.74
CFTRP13569 AC126182.1-201ENST00000478134 357 ntBASIC4.18□□□□□ -1.74
CFTRP13569 CKS1BP2-201ENST00000497342 240 ntBASIC4.18□□□□□ -1.74
CFTRP13569 KCTD9P5-201ENST00000504141 1170 ntBASIC4.18□□□□□ -1.74
CFTRP13569 AC092851.1-201ENST00000535964 478 ntBASIC4.18□□□□□ -1.74
CFTRP13569 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.18□□□□□ -1.74
CFTRP13569 AL021368.2-201ENST00000606125 5352 ntBASIC4.18□□□□□ -1.74
CFTRP13569 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CFTRP13569 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.18□□□□□ -1.74
CFTRP13569 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CFTRP13569 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.18□□□□□ -1.74
CFTRP13569 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CFTRP13569 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.18□□□□□ -1.74
CFTRP13569 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.18□□□□□ -1.74
CFTRP13569 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.18□□□□□ -1.74
CFTRP13569 AC116158.1-201ENST00000560231 2129 ntBASIC4.18□□□□□ -1.74
CFTRP13569 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.17□□□□□ -1.74
CFTRP13569 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CFTRP13569 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CFTRP13569 AC069528.2-201ENST00000624849 1991 ntBASIC4.17□□□□□ -1.74
CFTRP13569 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CFTRP13569 OR52B1P-201ENST00000316506 909 ntBASIC4.17□□□□□ -1.74
CFTRP13569 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.17□□□□□ -1.74
CFTRP13569 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.17□□□□□ -1.74
CFTRP13569 MRPL50P4-201ENST00000446432 475 ntBASIC4.17□□□□□ -1.74
CFTRP13569 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.17□□□□□ -1.74
CFTRP13569 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.17□□□□□ -1.74
CFTRP13569 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.17□□□□□ -1.74
CFTRP13569 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.16□□□□□ -1.74
CFTRP13569 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CFTRP13569 RPL9P7-201ENST00000330965 580 ntBASIC4.16□□□□□ -1.74
CFTRP13569 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CFTRP13569 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.16□□□□□ -1.74
CFTRP13569 RN7SKP140-201ENST00000411196 284 ntBASIC4.16□□□□□ -1.74
CFTRP13569 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.16□□□□□ -1.74
CFTRP13569 AC068587.2-201ENST00000478386 781 ntBASIC4.16□□□□□ -1.74
CFTRP13569 AC119751.1-201ENST00000513357 765 ntBASIC4.16□□□□□ -1.74
CFTRP13569 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CFTRP13569 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.16□□□□□ -1.74
CFTRP13569 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.16□□□□□ -1.74
CFTRP13569 AC091564.4-201ENST00000533934 2194 ntBASIC4.16□□□□□ -1.74
CFTRP13569 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CFTRP13569 MIR148B-201ENST00000362252 99 ntBASIC4.15□□□□□ -1.75
CFTRP13569 RNU6-253P-201ENST00000384730 105 ntBASIC4.15□□□□□ -1.75
CFTRP13569 MIR181B1-201ENST00000385240 110 ntBASIC4.15□□□□□ -1.75
CFTRP13569 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.15□□□□□ -1.75
CFTRP13569 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.15□□□□□ -1.75
CFTRP13569 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.15□□□□□ -1.75
CFTRP13569 SEPT7P6-201ENST00000469999 1143 ntBASIC4.15□□□□□ -1.75
CFTRP13569 TXNP6-201ENST00000510190 310 ntBASIC4.15□□□□□ -1.75
CFTRP13569 VWA8P1-201ENST00000510889 176 ntBASIC4.15□□□□□ -1.75
CFTRP13569 AC107222.1-201ENST00000510899 637 ntBASIC4.15□□□□□ -1.75
CFTRP13569 AC021269.2-201ENST00000532318 330 ntBASIC4.15□□□□□ -1.75
CFTRP13569 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.15□□□□□ -1.75
CFTRP13569 AC009318.2-201ENST00000610917 651 ntBASIC4.15□□□□□ -1.75
CFTRP13569 AC092184.1-201ENST00000625042 715 ntBASIC4.15□□□□□ -1.75
CFTRP13569 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.14□□□□□ -1.75
CFTRP13569 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CFTRP13569 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CFTRP13569 AL590004.2-201ENST00000404787 371 ntBASIC4.14□□□□□ -1.75
CFTRP13569 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms