Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SFTPBP07988 AC244517.1-201ENST00000606030 2086 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 RLIMP1-201ENST00000339626 1680 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 OR11H4-201ENST00000315409 1082 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 SNORA62.3-201ENST00000365110 153 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 RNA5SP283-201ENST00000365604 119 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 MIR134-201ENST00000385258 73 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AL136310.1-201ENST00000404926 654 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 RPL21P65-201ENST00000406094 466 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 MIR1251-201ENST00000408552 70 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 RNA5SP80-201ENST00000410475 111 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 RNU2-15P-201ENST00000410692 191 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC068533.2-201ENST00000411872 306 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 MTATP6P20-201ENST00000414147 562 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 CRYBB2P1-203ENST00000415709 538 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AL356320.2-201ENST00000417263 507 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 RPL7P2-201ENST00000427639 268 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC017083.1-201ENST00000428093 483 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 PSMA6P3-201ENST00000428242 164 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AL117339.2-201ENST00000430475 180 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SFTPBP07988 Z95327.1-201ENST00000446082 482 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 MTCYBP11-201ENST00000447254 1109 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.41□□□□□ -1.86
SFTPBP07988 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.41□□□□□ -1.86
SFTPBP07988 RPL38P1-201ENST00000460914 211 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 RPS15AP17-201ENST00000470598 390 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 VN1R17P-201ENST00000472048 1090 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 RN7SL132P-201ENST00000478131 296 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 HMGB1P28-201ENST00000507778 552 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.41□□□□□ -1.86
SFTPBP07988 AC004062.1-201ENST00000509926 645 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC026726.1-201ENST00000512859 601 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC104986.1-201ENST00000517978 436 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.41□□□□□ -1.86
SFTPBP07988 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.41□□□□□ -1.86
SFTPBP07988 SLC2A13P1-201ENST00000531560 322 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC005832.3-201ENST00000537929 631 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.41□□□□□ -1.86
SFTPBP07988 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.41□□□□□ -1.86
SFTPBP07988 HIGD1AP17-201ENST00000554576 276 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.41□□□□□ -1.86
SFTPBP07988 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 CCDC58P3-201ENST00000590792 430 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AC012669.1-201ENST00000603209 283 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 AL591424.2-201ENST00000617023 128 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SFTPBP07988 AC048347.1-201ENST00000624621 427 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 MIR1322-201ENST00000638013 71 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.41□□□□□ -1.86
SFTPBP07988 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SFTPBP07988 EXOC5P1-201ENST00000510543 1969 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SFTPBP07988 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SFTPBP07988 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SFTPBP07988 AF127577.6-201ENST00000623352 2191 ntBASIC3.41□□□□□ -1.86
SFTPBP07988 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SFTPBP07988 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
SFTPBP07988 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SFTPBP07988 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SFTPBP07988 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SFTPBP07988 MIR554-201ENST00000384874 96 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SFTPBP07988 RN7SKP202-201ENST00000410439 330 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 HSPE1P12-201ENST00000412576 301 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 RPS7P15-201ENST00000415804 584 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.4□□□□□ -1.87
SFTPBP07988 MTCO3P12-201ENST00000416718 547 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 AC127526.1-201ENST00000417526 366 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 AL159169.1-201ENST00000421119 127 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 AC012065.2-201ENST00000421295 375 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 NANOGP5-201ENST00000424456 877 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 AC079780.1-201ENST00000428259 207 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.4□□□□□ -1.87
SFTPBP07988 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.4□□□□□ -1.87
SFTPBP07988 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SFTPBP07988 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.4□□□□□ -1.87
SFTPBP07988 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.4□□□□□ -1.87
SFTPBP07988 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.4□□□□□ -1.87
SFTPBP07988 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SFTPBP07988 ZNF886P-201ENST00000450781 723 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 HMGB1P15-201ENST00000453854 435 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 USP9YP34-201ENST00000453983 808 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SFTPBP07988 TMED11P-201ENST00000479478 690 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 PPIAP15-201ENST00000479662 484 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 AL132838.2-201ENST00000492041 314 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 NIPA2P2-201ENST00000496376 1083 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 SETP14-201ENST00000497538 873 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 MTCYBP17-201ENST00000503579 789 ntBASIC3.4□□□□□ -1.87
SFTPBP07988 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.4□□□□□ -1.87
SFTPBP07988 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.4□□□□□ -1.87
SFTPBP07988 AC006390.1-201ENST00000508068 283 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms