| MT1A | P04731 | MRPL50P4-201 | ENST00000446432 | 475 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | VN1R48P-201 | ENST00000448149 | 1036 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL109741.2-201 | ENST00000455561 | 343 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | RPS15AP1-201 | ENST00000457423 | 391 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | MTND6P32-201 | ENST00000457611 | 483 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | LINC00430-201 | ENST00000457672 | 597 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | NDUFA6-201 | ENST00000470753 | 475 nt | TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AP000852.1-201 | ENST00000472460 | 573 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | MDM2-217 | ENST00000478070 | 692 nt | TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC037198.2-201 | ENST00000478845 | 733 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL049873.1-201 | ENST00000480540 | 376 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC016687.1-201 | ENST00000482574 | 353 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | RPL31P13-201 | ENST00000484151 | 370 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | RAD51AP1P1-201 | ENST00000484195 | 1001 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC092059.1-201 | ENST00000485347 | 429 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | LNX1-AS2-201 | ENST00000502410 | 347 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AIG1P1-201 | ENST00000503376 | 148 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | LINC01332-201 | ENST00000506612 | 502 nt | TSL 4 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | RNU2-58P-201 | ENST00000516403 | 183 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | RNU1-103P-201 | ENST00000516502 | 125 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC024958.1-201 | ENST00000519364 | 902 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC090136.1-201 | ENST00000520009 | 240 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | HMGB1P41-201 | ENST00000520234 | 440 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | LINC00535-204 | ENST00000520513 | 305 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC100870.1-201 | ENST00000522035 | 505 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC090539.1-201 | ENST00000523907 | 434 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC239860.2-201 | ENST00000525886 | 270 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC103681.1-202 | ENST00000534342 | 449 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC079362.1-201 | ENST00000546865 | 525 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | GLIPR1L1-204 | ENST00000548623 | 484 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | LINC02300-201 | ENST00000549742 | 665 nt | TSL 4 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | LINC02325-202 | ENST00000554260 | 567 nt | TSL 4 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL445363.2-202 | ENST00000555361 | 435 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | FOPNL-205 | ENST00000573429 | 646 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | MIR3162-201 | ENST00000581818 | 82 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC087749.2-201 | ENST00000583910 | 352 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC027514.2-201 | ENST00000591014 | 637 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC072062.1-205 | ENST00000595058 | 962 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC098617.1-216 | ENST00000602099 | 708 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | BX664608.1-201 | ENST00000610519 | 487 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC090617.7-201 | ENST00000623952 | 126 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC092608.2-201 | ENST00000624427 | 218 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC074099.1-201 | ENST00000634100 | 679 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL365361.1-201 | ENST00000566942 | 3481 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | MGAT4C-210 | ENST00000620241 | 3194 nt | APPRIS P1 TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | HDX-206 | ENST00000506585 | 6158 nt | TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC009487.4-201 | ENST00000624969 | 3585 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | C9orf153-204 | ENST00000613665 | 1738 nt | APPRIS P2 TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | ZNF117-203 | ENST00000610793 | 1374 nt | TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | CYLC2-201 | ENST00000374798 | 2171 nt | APPRIS P1 TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | ZNF680-202 | ENST00000447137 | 2159 nt | TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | ZNF470-202 | ENST00000391709 | 6601 nt | APPRIS P1 TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC092111.2-201 | ENST00000611627 | 1414 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | PRKG2-206 | ENST00000545647 | 3852 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | RGPD1-204 | ENST00000559485 | 5247 nt | APPRIS P2 TSL 1 (best) BASIC | 0.8 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL592437.2-201 | ENST00000421655 | 2434 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | PPHLN1-208 | ENST00000449194 | 1583 nt | APPRIS ALT1 TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC114316.2-202 | ENST00000502934 | 2957 nt | TSL 2 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | HERC4-201 | ENST00000277817 | 4371 nt | TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AMY2B-208 | ENST00000610648 | 1736 nt | APPRIS P1 TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC114546.3-201 | ENST00000623582 | 1734 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | ZMYM2-203 | ENST00000382874 | 10139 nt | APPRIS P1 TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | SOCS4-201 | ENST00000339298 | 6667 nt | APPRIS P1 TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | SNORD62.1-201 | ENST00000362541 | 86 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | LINC00587-201 | ENST00000374801 | 590 nt | TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | SAR1AP2-201 | ENST00000392696 | 594 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | RNU2-37P-201 | ENST00000410695 | 177 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC006150.1-201 | ENST00000412014 | 263 nt | TSL 5 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | RAP1BP1-201 | ENST00000412709 | 553 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC080125.1-201 | ENST00000414888 | 684 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | TRAPPC2P10-201 | ENST00000415662 | 323 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | RPLP0P7-201 | ENST00000416050 | 667 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | MRPL50P2-201 | ENST00000416821 | 482 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | RPL7P10-201 | ENST00000417407 | 739 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL645465.1-201 | ENST00000417765 | 642 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL034379.1-201 | ENST00000423216 | 253 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC017074.1-201 | ENST00000424612 | 561 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | LINC01799-202 | ENST00000426260 | 625 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | MAGEA8-AS1-201 | ENST00000427671 | 476 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL160411.1-201 | ENST00000429853 | 400 nt | TSL 2 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC004837.2-201 | ENST00000435766 | 731 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC011816.1-201 | ENST00000441346 | 546 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | MLIP-IT1-201 | ENST00000441845 | 643 nt | TSL 2 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AP000146.1-203 | ENST00000444178 | 309 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL589963.1-201 | ENST00000449282 | 727 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | RPL23AP15-201 | ENST00000450202 | 459 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | GAS5-221 | ENST00000450589 | 632 nt | TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AL109933.2-201 | ENST00000452651 | 260 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | SNRPG-206 | ENST00000454893 | 527 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC027673.1-201 | ENST00000456245 | 405 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | ARPC3P2-201 | ENST00000457786 | 533 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AP001486.1-201 | ENST00000463339 | 476 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | RN7SL432P-201 | ENST00000484057 | 298 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | SRIP1-201 | ENST00000489235 | 288 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | AC004052.1-202 | ENST00000505680 | 516 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | LINC01957-201 | ENST00000506392 | 751 nt | TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | NPY1R-204 | ENST00000509586 | 1017 nt | TSL 2 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | TBCAP3-201 | ENST00000512475 | 312 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | MEF2C-AS1-212 | ENST00000514158 | 713 nt | TSL 5 BASIC | 0.79 | □□□□□ -2.28 | | |
| MT1A | P04731 | RNU6-56P-201 | ENST00000516986 | 93 nt | BASIC | 0.79 | □□□□□ -2.28 | | |