Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.46□□□□□ -1.86
MT-ND1P03886 MTND4P33-201ENST00000556706 766 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 AC090888.2-201ENST00000559765 1144 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 AC009097.3-201ENST00000563557 1018 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 MIR3912-201ENST00000577566 105 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.46□□□□□ -1.86
MT-ND1P03886 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.46□□□□□ -1.86
MT-ND1P03886 AC091057.2-201ENST00000602594 792 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 AC025588.3-201ENST00000604182 274 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 AL365503.1-201ENST00000605247 905 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 Z99289.3-201ENST00000605586 594 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 AC024257.5-201ENST00000612739 531 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MT-ND1P03886 AL157770.1-201ENST00000623049 439 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MT-ND1P03886 MIR6830-201ENST00000636015 70 ntBASIC3.46□□□□□ -1.86
MT-ND1P03886 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.46□□□□□ -1.86
MT-ND1P03886 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
MT-ND1P03886 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MT-ND1P03886 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
MT-ND1P03886 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.46□□□□□ -1.86
MT-ND1P03886 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.46□□□□□ -1.86
MT-ND1P03886 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MT-ND1P03886 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.45□□□□□ -1.86
MT-ND1P03886 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
MT-ND1P03886 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MT-ND1P03886 RNU6-339P-201ENST00000384310 107 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 SNORD65.1-201ENST00000390889 71 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 RNU2-71P-201ENST00000411395 189 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 CRYBB2P1-203ENST00000415709 538 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.45□□□□□ -1.86
MT-ND1P03886 TOMM22P1-201ENST00000418578 312 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 RPL7P44-201ENST00000424827 742 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 RPL21P66-201ENST00000426566 466 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.45□□□□□ -1.86
MT-ND1P03886 AL591719.1-201ENST00000444669 744 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 PTENP1-201ENST00000447117 1215 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.45□□□□□ -1.86
MT-ND1P03886 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
MT-ND1P03886 AC091951.3-201ENST00000504093 246 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AC048346.1-201ENST00000510247 144 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MT-ND1P03886 MTCO3P44-201ENST00000510977 541 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 USP9YP5-201ENST00000511770 630 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.45□□□□□ -1.86
MT-ND1P03886 RN7SKP122-201ENST00000515923 296 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 RNU6-885P-201ENST00000516607 104 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 RNU6-1073P-201ENST00000517182 106 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.45□□□□□ -1.86
MT-ND1P03886 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MT-ND1P03886 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.45□□□□□ -1.86
MT-ND1P03886 AC109635.4-202ENST00000531666 412 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 MTCO2P15-201ENST00000532655 656 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.45□□□□□ -1.86
MT-ND1P03886 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
MT-ND1P03886 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.45□□□□□ -1.86
MT-ND1P03886 AGGF1P6-201ENST00000569213 976 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MT-ND1P03886 AC120057.2-201ENST00000571520 271 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 MIR4425-201ENST00000580572 84 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AP001269.3-201ENST00000588718 329 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.45□□□□□ -1.86
MT-ND1P03886 AC015726.1-201ENST00000602353 681 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AC022022.2-201ENST00000602989 360 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AC103710.3-201ENST00000608157 948 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AL355493.4-201ENST00000618530 292 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 MIR6500-201ENST00000622700 86 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 AP002791.1-201ENST00000623291 381 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.45□□□□□ -1.86
MT-ND1P03886 AC090897.3-201ENST00000636973 1157 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MT-ND1P03886 MFSD8-236ENST00000641509 4050 ntBASIC3.45□□□□□ -1.86
MT-ND1P03886 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.44□□□□□ -1.86
MT-ND1P03886 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 AC126755.2-208ENST00000327792 462 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC138969.1-213ENST00000331436 462 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 RNU6-839P-201ENST00000363347 108 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNU6-263P-201ENST00000363811 107 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNU6-115P-201ENST00000364310 107 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNU4-28P-201ENST00000364739 141 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNA5SP235-201ENST00000365411 114 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 SNORA56-201ENST00000383966 129 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 Y_RNA.408-201ENST00000383987 102 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 SNORD116-23-201ENST00000384645 92 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 MTND4P13-201ENST00000402078 1023 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AL583834.1-201ENST00000406943 343 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNA5SP317-201ENST00000410176 116 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNU4-78P-201ENST00000410940 126 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNA5SP311-201ENST00000411290 116 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 HIGD1AP15-201ENST00000416198 280 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RPL22P18-201ENST00000417197 377 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.44□□□□□ -1.86
MT-ND1P03886 AL807761.1-201ENST00000417622 171 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms