Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-704P-201ENST00000364162 103 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 Y_RNA.380-201ENST00000365663 111 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 Y_RNA.530-201ENST00000384587 101 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 DSTNP4-201ENST00000399472 474 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 RPS20P2-201ENST00000402520 389 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-193P-201ENST00000410977 107 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC104651.2-201ENST00000447549 528 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 RN7SL222P-201ENST00000476452 299 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC012123.2-201ENST00000485809 248 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC108043.1-201ENST00000512696 574 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 RNU4-29P-201ENST00000515943 174 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AP001189.2-201ENST00000527320 189 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC103843.2-201ENST00000530523 682 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC090607.5-201ENST00000615692 224 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 PISRT1.1-201ENST00000616930 107 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC103858.2-201ENST00000621471 543 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AL732372.2-225ENST00000642124 456 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AL591135.1-201ENST00000401578 5914 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 AC109446.4-201ENST00000623235 2755 ntBASIC7.14□□□□□ -1.27
PDZRN3Q9UPQ7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC091812.1-201ENST00000432235 1948 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC006206.1-201ENST00000544842 3387 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC027287.1-201ENST00000553115 1453 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 RNU5E-1-201ENST00000362477 120 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 RNU5B-2P-201ENST00000363036 113 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 RN7SKP115-201ENST00000363177 317 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 Y_RNA.274-201ENST00000364714 101 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 ATP5HP3-201ENST00000396994 486 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AL645733.1-201ENST00000402250 217 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 RNU2-36P-201ENST00000410361 191 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 RPS15AP10-201ENST00000432472 382 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC058823.1-201ENST00000485315 474 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC106872.3-201ENST00000495104 446 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AP003072.2-201ENST00000527756 676 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC099489.2-201ENST00000574976 260 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC015922.4-201ENST00000612568 690 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AP002512.4-202ENST00000641599 4530 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 AC023421.1-201ENST00000590535 1785 ntBASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDZRN3Q9UPQ7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 PROS2P-201ENST00000474651 1951 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 U8.4-201ENST00000363626 134 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-280P-201ENST00000364145 104 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms