Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBEC3BQ9UH17 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
APOBEC3BQ9UH17 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 RNU6-353P-201ENST00000364266 108 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 RNA5SP42-201ENST00000364278 115 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 RNU6-283P-201ENST00000364788 107 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 MIR525-201ENST00000384978 85 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 U3.19-201ENST00000390893 196 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AL391417.1-201ENST00000404100 426 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 U3.39-201ENST00000408569 239 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 RNA5SP120-201ENST00000410900 112 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 BX323014.1-201ENST00000412876 237 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AC005326.1-201ENST00000429197 123 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 RPL21P110-201ENST00000433345 446 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 ELOCP11-201ENST00000436690 332 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AL591503.2-201ENST00000442314 1005 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 ELOCP16-201ENST00000444494 332 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AL050341.1-201ENST00000447743 313 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 MRPL35P4-201ENST00000453682 566 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 MTCO3P20-201ENST00000454926 688 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 CDC42P1-201ENST00000456658 548 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AP000893.1-201ENST00000474462 794 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 DSTNP2-201ENST00000504533 515 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 RNU6-415P-201ENST00000516252 97 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AP000926.4-201ENST00000527351 454 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AL389895.1-201ENST00000554127 252 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AL121576.1-201ENST00000556055 276 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 ZNF971P-201ENST00000562068 1249 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 CYP2C60P-201ENST00000566088 139 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AC011468.4-201ENST00000603942 409 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 Z82195.1-201ENST00000604558 398 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AC105148.1-201ENST00000604961 409 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AL160281.1-201ENST00000605307 311 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 MIR3651-201ENST00000630427 90 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AC017104.5-201ENST00000637647 639 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 AL645937.1-201ENST00000641739 1652 ntBASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC3BQ9UH17 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 CEP170P1-201ENST00000502249 4587 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 RPL37P3-201ENST00000456825 293 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 RN7SL594P-201ENST00000470590 287 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 RN7SL807P-201ENST00000470923 297 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AC084357.1-201ENST00000473404 255 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AC008494.2-201ENST00000514544 370 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 RNU6-276P-201ENST00000516114 96 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 COX6B1P6-201ENST00000522347 255 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 OR5AP1P-201ENST00000529730 940 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 MTCO1P40-201ENST00000574371 625 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 ZNF415P1-201ENST00000582279 1166 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AC245884.10-201ENST00000597355 337 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AC093673.2-201ENST00000609674 331 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AC022960.3-201ENST00000619794 441 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 PLCE1P1-201ENST00000622094 305 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 AC092608.3-201ENST00000625017 386 ntBASIC3.41□□□□□ -1.86
APOBEC3BQ9UH17 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms