Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 RPS7P2-201ENST00000435134 607 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 RNFT1P2-201ENST00000443064 757 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 RPL17P49-201ENST00000443728 411 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 CYCSP20-201ENST00000473154 315 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 HMGN2P13-201ENST00000476476 274 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 RPL32P34-201ENST00000486380 400 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 HMGB1P22-201ENST00000505315 124 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 TXNP6-201ENST00000510190 310 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 MTND2P31-201ENST00000512602 616 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 SNORA70.24-201ENST00000517233 118 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 MTCYBP28-201ENST00000566728 1132 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 MIR4504-201ENST00000577413 92 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 MIR4738-201ENST00000579134 87 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 OR4G1P-201ENST00000588632 938 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC006557.5-201ENST00000603126 811 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC018618.2-201ENST00000604770 446 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC020923.1-201ENST00000624021 917 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 ELL2P4-201ENST00000446870 1376 ntBASIC3.21□□□□□ -1.9
CTSFQ9UBX1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTSFQ9UBX1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 SNORA9-201ENST00000384215 133 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 SNORA51.12-201ENST00000384448 134 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 MIR491-201ENST00000384877 84 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 RNU1-101P-201ENST00000391171 127 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 SAR1AP2-201ENST00000392696 594 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AL354719.1-201ENST00000406535 843 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 RN7SKP111-201ENST00000410349 271 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 RNA5SP120-201ENST00000410900 112 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 PNRC2P1-201ENST00000423940 420 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 DPPA2P1-201ENST00000428060 556 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC073508.1-201ENST00000428866 656 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AL513175.1-201ENST00000431492 780 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 RN7SKP116-201ENST00000516902 319 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC006518.1-201ENST00000541449 943 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC012254.4-201ENST00000588843 273 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AL021368.1-201ENST00000607490 540 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AL354976.1-201ENST00000613843 387 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC022149.2-201ENST00000621061 203 ntBASIC3.2□□□□□ -1.9
CTSFQ9UBX1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTSFQ9UBX1 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.19□□□□□ -1.9
CTSFQ9UBX1 AC103988.1-201ENST00000566382 2177 ntBASIC3.19□□□□□ -1.9
CTSFQ9UBX1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 RPS3AP26-201ENST00000398259 784 ntBASIC3.19□□□□□ -1.9
CTSFQ9UBX1 RNA5SP293-201ENST00000410527 113 ntBASIC3.19□□□□□ -1.9
CTSFQ9UBX1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 Z99755.1-201ENST00000414048 380 ntBASIC3.19□□□□□ -1.9
CTSFQ9UBX1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.19□□□□□ -1.9
CTSFQ9UBX1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 AC012498.1-201ENST00000424037 437 ntBASIC3.19□□□□□ -1.9
CTSFQ9UBX1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSFQ9UBX1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms