Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC008885.1-201ENST00000514930 301 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AP001207.1-201ENST00000524051 481 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AC034105.3-201ENST00000565294 442 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 MTCO3P24-201ENST00000572729 782 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AL031985.2-201ENST00000600955 480 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AC004832.5-201ENST00000608677 401 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AP004607.9-201ENST00000618202 316 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS29Q9UBQ0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS29Q9UBQ0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 GSTA8P-201ENST00000404253 637 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 U3.42-201ENST00000408746 214 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 UBE2V1P1-201ENST00000430836 445 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AL606490.7-201ENST00000433136 191 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 HSPE1P28-201ENST00000443139 211 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AL592437.1-201ENST00000443781 492 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 Z77249.1-201ENST00000444622 1175 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 MTCO3P35-201ENST00000485582 781 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC107398.1-201ENST00000486904 505 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC006445.1-201ENST00000491925 405 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 OR2A20P-203ENST00000498397 1268 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC104115.2-201ENST00000523026 687 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 PSMA2P1-201ENST00000526365 646 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 YPEL5P2-201ENST00000605553 359 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC084036.1-201ENST00000609190 508 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AL390240.1-201ENST00000612950 384 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AL355578.1-201ENST00000607405 1328 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC108206.1-201ENST00000570186 4159 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 AC004925.1-201ENST00000624256 2706 ntBASIC2.83□□□□□ -1.96
VPS29Q9UBQ0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC073055.1-201ENST00000456901 1621 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC011978.2-201ENST00000569835 2054 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AL354719.1-201ENST00000406535 843 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 BMS1P22-201ENST00000414726 313 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC005517.2-201ENST00000424673 553 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AL358232.1-201ENST00000448030 501 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AL162389.1-201ENST00000449233 177 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 Z99714.1-201ENST00000450463 807 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 RPL27AP5-201ENST00000469428 449 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 RPS26P21-201ENST00000475397 348 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC118282.1-201ENST00000506408 765 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC119751.1-201ENST00000513357 765 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 OR5G4P-201ENST00000525251 760 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC107016.2-201ENST00000547968 190 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 MIR4506-201ENST00000584693 77 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC006116.7-201ENST00000590141 756 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AL133393.1-201ENST00000603277 287 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 YWHAQP7-201ENST00000603536 658 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC091488.1-201ENST00000604239 660 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC124312.4-201ENST00000605533 310 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 Z99129.2-201ENST00000619967 314 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 AC244100.1-202ENST00000621554 382 ntBASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS29Q9UBQ0 MTND5P1-201ENST00000445440 1375 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms