Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 AC011477.5-201ENST00000586571 259 ntBASIC5.88□□□□□ -1.47
CNTN3Q9P232 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 AL022099.1-201ENST00000604551 712 ntBASIC5.88□□□□□ -1.47
CNTN3Q9P232 AC109583.2-201ENST00000617367 129 ntBASIC5.88□□□□□ -1.47
CNTN3Q9P232 AC093849.1-201ENST00000563631 2209 ntBASIC5.88□□□□□ -1.47
CNTN3Q9P232 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CNTN3Q9P232 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CNTN3Q9P232 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTN3Q9P232 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTN3Q9P232 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTN3Q9P232 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTN3Q9P232 DNM1P47-203ENST00000571780 12667 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC093671.1-201ENST00000624981 2929 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTN3Q9P232 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 MIR133A2-201ENST00000347538 102 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 RN7SKP185-201ENST00000362813 326 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 RN7SKP44-201ENST00000363602 316 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 RNU5A-8P-201ENST00000364102 114 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 U3.11-201ENST00000364476 212 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 RNU6-146P-201ENST00000384602 108 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 RNU2-29P-201ENST00000410423 189 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 MED13P1-201ENST00000428342 171 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC138761.5-201ENST00000433967 325 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 IPO7P1-201ENST00000442031 636 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC104073.1-201ENST00000451988 151 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC108059.3-201ENST00000456388 214 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 RNU7-152P-201ENST00000458982 64 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 PLGLA-201ENST00000465668 449 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 RPL7L1P8-201ENST00000469911 741 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 RN7SL30P-201ENST00000488416 306 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC110792.2-201ENST00000510278 224 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC093853.1-201ENST00000515689 483 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 RNU6-941P-201ENST00000516346 108 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 7SK.10-201ENST00000621414 298 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 MTND5P1-201ENST00000445440 1375 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 MTCO1P12-201ENST00000414273 1543 ntBASIC5.87□□□□□ -1.47
CNTN3Q9P232 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNTN3Q9P232 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.87□□□□□ -1.47
CNTN3Q9P232 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNTN3Q9P232 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 AC239868.2-201ENST00000564237 4527 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 AP001350.1-201ENST00000601906 1524 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTN3Q9P232 AL139276.1-201ENST00000311910 1001 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 U3.2-201ENST00000362981 210 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 U3.7-201ENST00000363668 216 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 SNORD116-29-201ENST00000384516 83 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 RNY4P36-201ENST00000391116 96 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 AL606923.1-201ENST00000406616 190 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 RNA5SP487-201ENST00000410186 122 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 GAPDHP25-201ENST00000447061 1001 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 RN7SL172P-201ENST00000460535 303 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 AC010683.1-201ENST00000473673 378 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 AC012181.1-201ENST00000479895 423 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 AC006499.3-201ENST00000506077 748 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 FTH1P21-201ENST00000512179 511 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 NARSP2-201ENST00000518524 679 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 IGLV2-28-201ENST00000520681 304 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 AC093012.1-202ENST00000549403 582 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 LSM3P2-201ENST00000551246 273 ntBASIC5.86□□□□□ -1.47
CNTN3Q9P232 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTN3Q9P232 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms