Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VTA1Q9NP79 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VTA1Q9NP79 KPNA2P2-201ENST00000419546 1489 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 ZNF33CP-201ENST00000432492 2030 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 AL161781.1-201ENST00000354277 403 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VTA1Q9NP79 RNA5SP366-201ENST00000365454 123 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 RNU6-769P-201ENST00000384407 104 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 SNORD115.1-201ENST00000391109 76 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 SNORA57.1-201ENST00000391227 145 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 RPL23AP26-201ENST00000412728 464 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 USP9YP13-201ENST00000417797 480 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC010975.2-201ENST00000427781 588 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 OR4F13P-201ENST00000428478 931 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 NANOGP6-201ENST00000429190 847 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 UQCRHP4-201ENST00000471686 272 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC091167.1-201ENST00000492017 396 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 BNIP3P41-201ENST00000503774 571 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC113430.1-201ENST00000506872 718 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 MTCO1P35-201ENST00000515270 228 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 MRPL49P2-201ENST00000521066 465 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC245505.1-201ENST00000556398 224 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 SEPT7P9-203ENST00000604116 343 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC020634.1-201ENST00000608701 549 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 AL589743.7-201ENST00000612637 233 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC099842.1-201ENST00000619919 596 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AL023881.1-201ENST00000621088 301 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC004009.2-201ENST00000623016 728 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 OR51H2P-202ENST00000641424 3046 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VTA1Q9NP79 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 AC100778.3-201ENST00000580060 1750 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VTA1Q9NP79 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 MAPK10-304ENST00000641341 3984 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC107068.1-201ENST00000563286 4218 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 ENSAP1-201ENST00000392855 326 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 AL080315.1-201ENST00000406055 466 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 GEMIN8P3-201ENST00000445417 720 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 DHFRP3-201ENST00000455595 559 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 OR9M1P-201ENST00000459641 921 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 RPL7P19-201ENST00000469948 618 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC034159.1-201ENST00000513885 583 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC016065.2-201ENST00000514530 444 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 AP003730.1-201ENST00000524605 285 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 MIR5697-201ENST00000578045 78 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 MIR548AB-201ENST00000584917 84 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 COX6CP4-201ENST00000605798 228 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC103710.1-201ENST00000610003 901 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC138749.5-201ENST00000611461 208 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC116165.2-201ENST00000616705 206 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.07□□□□□ -1.6
VTA1Q9NP79 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC000123.2-201ENST00000623124 461 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 MIR3653-201ENST00000625572 110 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 AC092447.10-201ENST00000620607 1652 ntBASIC5.07□□□□□ -1.6
VTA1Q9NP79 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTA1Q9NP79 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTA1Q9NP79 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AL139811.1-201ENST00000424779 2299 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VTA1Q9NP79 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 Y_RNA.3-201ENST00000362331 103 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 RNA5SP28-201ENST00000363841 119 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 RNU6-289P-201ENST00000364093 107 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms