Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.36□□□□□ -1.71
EBF3Q9H4W6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EBF3Q9H4W6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.36□□□□□ -1.71
EBF3Q9H4W6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
EBF3Q9H4W6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
EBF3Q9H4W6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.36□□□□□ -1.71
EBF3Q9H4W6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 RNU6-500P-201ENST00000362349 107 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 RNU6-931P-201ENST00000363850 107 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 MIR16-1-201ENST00000385271 89 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 ENSAP1-201ENST00000392855 326 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 MIR1911-201ENST00000410783 80 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 MTCYBP38-201ENST00000417160 1123 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 FNDC3CP-201ENST00000420795 1155 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AL389915.1-201ENST00000422463 466 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AL022400.1-201ENST00000423946 935 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 MTND4P28-201ENST00000426217 387 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC073335.1-201ENST00000427776 363 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 MTCO1P54-201ENST00000430139 712 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AL590103.1-201ENST00000434488 307 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC241584.1-201ENST00000438469 1241 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 RPS29P7-201ENST00000439662 171 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 MTCO2P25-201ENST00000447065 681 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 RPL7P1-201ENST00000468161 747 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 RPL7P9-201ENST00000468715 747 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 RPL23AP2-201ENST00000471227 466 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC126182.1-201ENST00000478134 357 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 WBP1LP4-201ENST00000505043 344 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC109635.3-201ENST00000529536 185 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 ADI1P3-201ENST00000549509 470 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 RPS3AP4-201ENST00000555161 764 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC079171.1-201ENST00000568788 914 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC053481.4-201ENST00000583164 216 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC091946.2-201ENST00000606105 291 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC025594.3-201ENST00000613068 790 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC072046.2-201ENST00000618366 268 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AL356596.1-201ENST00000624230 379 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 PCMTD1P7-201ENST00000634506 357 ntBASIC4.35□□□□□ -1.71
EBF3Q9H4W6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.35□□□□□ -1.71
EBF3Q9H4W6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 RNU1-15P-201ENST00000353977 144 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 RNU1-44P-201ENST00000384453 163 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 MIR554-201ENST00000384874 96 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 RPS3AP24-201ENST00000407896 734 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC009302.1-201ENST00000417147 390 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 GTF2IP23-201ENST00000423746 351 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 MTND1P2-201ENST00000430604 821 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 ELOCP10-201ENST00000440624 327 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 FGF7P6-202ENST00000451282 293 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 RPL5P24-201ENST00000463742 885 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 RPL7P18-201ENST00000478965 734 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 RPS29P19-201ENST00000479709 171 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.34□□□□□ -1.71
EBF3Q9H4W6 VN1R105P-201ENST00000486595 910 ntBASIC4.34□□□□□ -1.71
EBF3Q9H4W6 RPS26P15-201ENST00000488067 348 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms