Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.15□□□□□ -1.91
LITAFQ99732 RPS4XP14-201ENST00000493072 781 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.15□□□□□ -1.91
LITAFQ99732 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC105914.1-201ENST00000511798 226 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 NPM1P41-201ENST00000512920 831 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 Vault.3-201ENST00000516676 95 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 RNU6-445P-201ENST00000516949 107 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.15□□□□□ -1.91
LITAFQ99732 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LITAFQ99732 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.15□□□□□ -1.91
LITAFQ99732 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC079600.1-201ENST00000550326 297 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.15□□□□□ -1.91
LITAFQ99732 AL049839.1-201ENST00000556151 657 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.15□□□□□ -1.91
LITAFQ99732 CYP4A43P-201ENST00000568156 121 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC099489.2-201ENST00000574976 260 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC090615.1-201ENST00000577519 154 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 MIR1273E-201ENST00000581165 102 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 MIR3118-1-201ENST00000581787 76 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 MIR4512-201ENST00000583257 77 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.15□□□□□ -1.91
LITAFQ99732 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC069307.1-201ENST00000602820 447 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC105254.2-201ENST00000603636 436 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC007566.2-201ENST00000603642 413 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AL391646.1-201ENST00000603860 190 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC121334.2-201ENST00000605387 271 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC055876.5-201ENST00000605667 259 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 MIR98-201ENST00000606724 119 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC010424.2-201ENST00000607594 443 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AL391813.2-201ENST00000609113 322 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AL355472.4-201ENST00000610233 626 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AL133173.2-201ENST00000614270 90 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 MIR6736-201ENST00000616799 59 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC002553.4-201ENST00000616896 331 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC090527.3-201ENST00000619041 548 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LITAFQ99732 AC015908.5-201ENST00000623289 343 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LITAFQ99732 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.15□□□□□ -1.91
LITAFQ99732 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LITAFQ99732 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LITAFQ99732 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LITAFQ99732 NUP58P1-201ENST00000502546 1738 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 AC114546.3-201ENST00000623582 1734 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LITAFQ99732 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.15□□□□□ -1.91
LITAFQ99732 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.15□□□□□ -1.91
LITAFQ99732 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LITAFQ99732 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
LITAFQ99732 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LITAFQ99732 MTND5P33-201ENST00000571250 1450 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LITAFQ99732 IQCB2P-201ENST00000401788 1633 ntBASIC3.15□□□□□ -1.91
LITAFQ99732 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LITAFQ99732 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LITAFQ99732 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LITAFQ99732 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
LITAFQ99732 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LITAFQ99732 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LITAFQ99732 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LITAFQ99732 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LITAFQ99732 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LITAFQ99732 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LITAFQ99732 RNU5E-1-201ENST00000362477 120 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 RNU6-282P-201ENST00000365357 103 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LITAFQ99732 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LITAFQ99732 FGF7P8-201ENST00000402994 292 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.14□□□□□ -1.91
LITAFQ99732 Z82198.3-201ENST00000421145 199 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AL590609.2-201ENST00000421430 368 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.14□□□□□ -1.91
LITAFQ99732 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 MTCO2P19-201ENST00000427513 598 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.14□□□□□ -1.91
LITAFQ99732 BTF3P10-201ENST00000433415 495 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC3.14□□□□□ -1.91
LITAFQ99732 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.14□□□□□ -1.91
LITAFQ99732 RPS17P8-201ENST00000434525 335 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 MTCO3P18-201ENST00000440206 761 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AL049734.2-201ENST00000441066 616 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.14□□□□□ -1.91
LITAFQ99732 KNOP1P3-201ENST00000446933 426 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.14□□□□□ -1.91
LITAFQ99732 HLA-DPA3-207ENST00000454398 229 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.14□□□□□ -1.91
LITAFQ99732 SCARNA10-201ENST00000459255 330 ntBASIC3.14□□□□□ -1.91
LITAFQ99732 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms