Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS50Q96JG6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC108467.2-201ENST00000617640 1597 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS50Q96JG6 FGF7P2-201ENST00000332473 296 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL590240.1-201ENST00000334118 313 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 Y_RNA.3-201ENST00000362331 103 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 RNU6-289P-201ENST00000364093 107 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 U3.15-201ENST00000365398 212 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 SNORA56-201ENST00000383966 129 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 RNU6-1226P-201ENST00000384317 107 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 RNA5SP397-201ENST00000391323 118 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 SDHCP2-201ENST00000398565 501 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL603766.1-201ENST00000407763 664 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL023807.1-201ENST00000407932 359 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 RAB28P1-201ENST00000411517 641 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 RSU1P3-201ENST00000412878 835 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 RPS7P13-201ENST00000413955 498 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 RPS3AP9-201ENST00000417027 792 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC096632.1-201ENST00000427395 310 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL031667.1-201ENST00000440222 725 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 RPS26P56-201ENST00000444468 240 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 ARL2BPP10-201ENST00000446487 531 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS50Q96JG6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC110792.2-201ENST00000510278 224 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL117351.2-201ENST00000513571 157 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 IGLVIV-53-201ENST00000520107 367 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 ZNF705CP-201ENST00000530515 889 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC013828.2-201ENST00000532487 235 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC093249.4-201ENST00000564755 259 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC209154.1-201ENST00000582156 337 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC069061.3-201ENST00000582254 823 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 MIR5096-201ENST00000583713 70 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC079089.3-201ENST00000603094 673 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AP000403.1-201ENST00000603349 851 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL133338.2-201ENST00000604292 736 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AL139286.1-201ENST00000604465 483 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC010680.4-201ENST00000605334 543 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC090186.1-201ENST00000605991 572 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC113194.1-201ENST00000606037 500 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC097468.3-201ENST00000607956 456 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 Z99129.1-201ENST00000612510 255 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 AP005019.3-201ENST00000620418 560 ntBASIC4.44□□□□□ -1.7
VPS50Q96JG6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS50Q96JG6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS50Q96JG6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS50Q96JG6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS50Q96JG6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 Y_RNA.41-201ENST00000362646 102 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 RNU6-1243P-201ENST00000364028 107 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 SNORD113.2-201ENST00000364166 89 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 RNA5SP505-201ENST00000364748 108 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 MIR141-201ENST00000384975 95 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 RNU6-952P-201ENST00000391164 108 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC025750.1-201ENST00000399891 379 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC136624.1-201ENST00000400791 413 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AL133384.1-201ENST00000412744 351 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AL389915.1-201ENST00000422463 466 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AL391219.1-201ENST00000422570 483 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 OR2B7P-201ENST00000429302 934 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms