Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.44□□□□□ -1.38
HLA-CQ95604 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-CQ95604 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-CQ95604 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 EIF2AP4-201ENST00000424793 1781 ntBASIC6.44□□□□□ -1.38
HLA-CQ95604 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.44□□□□□ -1.38
HLA-CQ95604 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HLA-CQ95604 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
HLA-CQ95604 Y_RNA.270-201ENST00000364693 104 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 RN7SKP125-201ENST00000410481 302 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC004383.1-201ENST00000438135 289 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 DAP3P1-201ENST00000441522 278 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 FABP5P13-201ENST00000452144 328 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC092436.3-201ENST00000511788 257 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 IGKV2D-23-201ENST00000518179 286 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.43□□□□□ -1.38
HLA-CQ95604 MIR4675-201ENST00000577898 77 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 AC012669.1-201ENST00000603209 283 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 AL451044.1-201ENST00000604867 238 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 Mico1.1-201ENST00000611698 204 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 RPSAP73-201ENST00000614820 330 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 AL589994.2-201ENST00000621124 579 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-CQ95604 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC138915.4-201ENST00000565549 4147 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC005839.1-201ENST00000624148 3213 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
HLA-CQ95604 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 AL021877.2-201ENST00000624442 10684 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 AC097461.1-201ENST00000568928 2821 ntBASIC6.43□□□□□ -1.38
HLA-CQ95604 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-CQ95604 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
HLA-CQ95604 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-CQ95604 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-CQ95604 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
HLA-CQ95604 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-CQ95604 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-CQ95604 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-CQ95604 AC009120.2-204ENST00000621548 2032 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-CQ95604 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-CQ95604 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-CQ95604 AC008758.3-201ENST00000507003 1829 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-CQ95604 SELENOWP1-201ENST00000322792 252 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 RNU6-212P-201ENST00000362642 104 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 Y_RNA.64-201ENST00000362845 102 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 SNORA23-201ENST00000365128 182 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 RNU6-190P-201ENST00000384154 102 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 HMGB1P20-201ENST00000402555 677 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 RNU6-174P-201ENST00000410406 106 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 SYF2P2-201ENST00000417620 583 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 AC126120.1-201ENST00000431082 470 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 AL133396.1-201ENST00000432048 687 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 RPL12P3-201ENST00000440080 396 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 CHEK2P4-201ENST00000450340 246 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-CQ95604 AP000926.1-201ENST00000479573 241 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-CQ95604 RPL30P11-201ENST00000495304 339 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 RN7SKP92-201ENST00000517266 244 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 AC069113.1-201ENST00000517763 267 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-CQ95604 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-CQ95604 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-CQ95604 NF1P5-201ENST00000588287 448 ntBASIC6.42□□□□□ -1.38
HLA-CQ95604 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-CQ95604 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HLA-CQ95604 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-CQ95604 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms