Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC011374.2-201ENST00000607135 526 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC004832.5-201ENST00000608677 401 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AL390240.1-201ENST00000612950 384 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AL356490.1-201ENST00000623079 479 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 AC002546.1-201ENST00000588041 2504 ntBASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDKL3Q8IVW4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 XPOTP1-201ENST00000443317 2398 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 RNU6-1293P-201ENST00000384077 107 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC245054.2-201ENST00000415639 319 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 OR2AS1P-201ENST00000427827 319 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 RPL21P40-201ENST00000428586 483 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AL159987.2-201ENST00000432754 307 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 NECAP1P2-201ENST00000455668 727 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC104689.1-201ENST00000473356 768 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 HMGN2P13-201ENST00000476476 274 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC093663.2-201ENST00000484625 313 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 MTCO3P35-201ENST00000485582 781 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AP001207.1-201ENST00000524051 481 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC091488.1-201ENST00000604239 660 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AL354976.1-201ENST00000613843 387 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 RNU6-156P-201ENST00000621869 107 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AF117829.1-206ENST00000621883 3802 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AP001350.1-201ENST00000601906 1524 ntBASIC3.24□□□□□ -1.89
CDKL3Q8IVW4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC117529.2-201ENST00000512159 2068 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 MIR208A-201ENST00000362287 71 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 SNORD46.1-201ENST00000364139 104 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 SNORA46-201ENST00000384762 135 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 MIR7-3-201ENST00000384898 110 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 RNU1-101P-201ENST00000391171 127 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC023128.2-201ENST00000420880 1223 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 YME1L1P1-201ENST00000429435 297 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC097713.2-201ENST00000430199 356 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AL353705.1-201ENST00000433468 480 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 UQCRHP3-201ENST00000451503 251 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 CABYRP1-201ENST00000465493 1045 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 PRDX3P4-201ENST00000470828 747 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AP003717.3-201ENST00000544832 1180 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 MTCO3P24-201ENST00000572729 782 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC079610.2-201ENST00000604818 690 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 AC244100.1-202ENST00000621554 382 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 NSRP1P1-201ENST00000444067 1693 ntBASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDKL3Q8IVW4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AL589826.1-201ENST00000340697 249 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 SNORA63.1-201ENST00000362493 131 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 MIR142-201ENST00000384835 87 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 273.6 ms