Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 RPL9P32-201ENST00000464118 620 ntBASIC3.18□□□□□ -1.9
UBR3Q6ZT12 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.18□□□□□ -1.9
UBR3Q6ZT12 AC093278.1-201ENST00000494700 600 ntBASIC3.18□□□□□ -1.9
UBR3Q6ZT12 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.18□□□□□ -1.9
UBR3Q6ZT12 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.18□□□□□ -1.9
UBR3Q6ZT12 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
UBR3Q6ZT12 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBR3Q6ZT12 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
UBR3Q6ZT12 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
UBR3Q6ZT12 MIR148B-201ENST00000362252 99 ntBASIC3.17□□□□□ -1.9
UBR3Q6ZT12 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
UBR3Q6ZT12 RNU6-76P-201ENST00000384060 104 ntBASIC3.17□□□□□ -1.9
UBR3Q6ZT12 AC108471.1-201ENST00000513977 287 ntBASIC3.17□□□□□ -1.9
UBR3Q6ZT12 PDCL2P2-201ENST00000533651 189 ntBASIC3.17□□□□□ -1.9
UBR3Q6ZT12 AC007423.1-201ENST00000605009 627 ntBASIC3.17□□□□□ -1.9
UBR3Q6ZT12 AC099063.3-201ENST00000642066 185 ntBASIC3.17□□□□□ -1.9
UBR3Q6ZT12 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
UBR3Q6ZT12 AC007342.7-201ENST00000624610 2337 ntBASIC3.17□□□□□ -1.9
UBR3Q6ZT12 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBR3Q6ZT12 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AC069218.2-201ENST00000411665 344 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 RPS4XP6-201ENST00000477670 797 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 RPL21P99-201ENST00000480369 423 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AC128657.1-201ENST00000549459 145 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AL355836.1-201ENST00000555951 870 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AC022960.2-201ENST00000616300 666 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 RPL21P132-201ENST00000331267 462 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AL355379.1-201ENST00000405542 640 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AL512430.2-201ENST00000406786 339 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 SNORA79B-201ENST00000410557 148 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AC007064.1-201ENST00000412238 351 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AL451074.5-201ENST00000415894 435 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AC245517.2-201ENST00000442890 346 ntBASIC3.16□□□□□ -1.9
UBR3Q6ZT12 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.16□□□□□ -1.9
UBR3Q6ZT12 XPOTP1-201ENST00000443317 2398 ntBASIC3.15□□□□□ -1.9
UBR3Q6ZT12 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
UBR3Q6ZT12 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
UBR3Q6ZT12 AC104454.1-201ENST00000421341 1401 ntBASIC3.15□□□□□ -1.9
UBR3Q6ZT12 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
UBR3Q6ZT12 RNU6-482P-201ENST00000391068 107 ntBASIC3.15□□□□□ -1.91
UBR3Q6ZT12 PTP4A1P5-201ENST00000420305 455 ntBASIC3.15□□□□□ -1.91
UBR3Q6ZT12 AL450263.2-201ENST00000439400 589 ntBASIC3.15□□□□□ -1.91
UBR3Q6ZT12 AC096638.1-201ENST00000444678 216 ntBASIC3.15□□□□□ -1.91
UBR3Q6ZT12 AC118282.1-201ENST00000506408 765 ntBASIC3.15□□□□□ -1.91
UBR3Q6ZT12 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.15□□□□□ -1.91
UBR3Q6ZT12 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.15□□□□□ -1.91
UBR3Q6ZT12 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.15□□□□□ -1.91
UBR3Q6ZT12 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.15□□□□□ -1.91
UBR3Q6ZT12 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
UBR3Q6ZT12 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBR3Q6ZT12 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 RPL30P9-201ENST00000465586 330 ntBASIC3.14□□□□□ -1.91
UBR3Q6ZT12 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 AC068657.1-201ENST00000520807 306 ntBASIC3.14□□□□□ -1.91
UBR3Q6ZT12 U4.3-201ENST00000621047 82 ntBASIC3.14□□□□□ -1.91
UBR3Q6ZT12 AC026634.1-201ENST00000634369 198 ntBASIC3.14□□□□□ -1.91
UBR3Q6ZT12 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
UBR3Q6ZT12 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 AL358913.1-201ENST00000554342 121 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 AL162233.1-201ENST00000620014 944 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 CRYM-AS1-204ENST00000637983 556 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 SYT14P1-202ENST00000600441 1448 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 HSPA8P4-201ENST00000511877 1920 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 RPS3AP26-201ENST00000398259 784 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 AL512633.1-201ENST00000399931 655 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 HMGB1P15-201ENST00000453854 435 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 RPL9P6-201ENST00000492764 598 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 SNORA31.1-201ENST00000515993 133 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 SNORA31.5-201ENST00000516190 133 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBR3Q6ZT12 ZNF72P-201ENST00000425869 1908 ntBASIC3.13□□□□□ -1.91
UBR3Q6ZT12 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
UBR3Q6ZT12 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms