Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC068587.1-201ENST00000483613 781 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 RN7SKP298-201ENST00000515950 94 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AF186190.1-201ENST00000517470 480 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC008694.2-201ENST00000517591 306 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AP003033.1-201ENST00000527244 415 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 MIR3682-201ENST00000581338 84 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC068790.6-201ENST00000602558 258 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 NDUFA8P1-201ENST00000605525 367 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC131902.3-201ENST00000611767 581 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AP001506.1-201ENST00000615444 211 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC104010.1-201ENST00000616889 150 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC006065.5-201ENST00000623427 349 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 SNORA70.2-201ENST00000364506 135 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 U3.20-201ENST00000390909 217 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC127526.1-201ENST00000417526 366 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 RPL36AP36-201ENST00000418616 301 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 RGS17P1-201ENST00000423358 553 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 BX890604.2-201ENST00000427883 474 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 MRPS18BP2-201ENST00000434310 759 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC016831.4-201ENST00000438302 307 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC112653.1-201ENST00000443851 386 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 TDGF1P1-201ENST00000445734 527 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC000111.2-201ENST00000448200 210 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 RPS4XP18-201ENST00000495480 763 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 RNU6-201P-201ENST00000517100 61 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 PARP1P2-201ENST00000556806 195 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC007599.1-201ENST00000568688 1174 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC022726.1-201ENST00000587475 207 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC011468.4-201ENST00000603942 409 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC011451.2-201ENST00000604303 598 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC010424.2-201ENST00000607594 443 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 SNORD91B-202ENST00000608459 222 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC008250.2-201ENST00000615261 205 ntBASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC144BQ3MJ40 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC092125.1-201ENST00000562568 1995 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 RNU1-83P-201ENST00000363426 164 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 U3.22-201ENST00000391120 215 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 RNU6-192P-201ENST00000391253 100 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 RNA5SP345-201ENST00000410646 108 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AL391219.1-201ENST00000422570 483 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 RPL23AP1-201ENST00000428990 471 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 SNORD121B-201ENST00000458838 81 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 ACTR3P3-201ENST00000480448 893 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 RPL23AP41-201ENST00000484754 458 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 NIP7P2-201ENST00000485801 544 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 DEFB109F-201ENST00000491870 277 ntBASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC144BQ3MJ40 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms