Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC012498.1-201ENST00000424037 437 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC019097.1-201ENST00000424783 735 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AL138799.3-201ENST00000438968 350 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 CBX1P4-201ENST00000439415 457 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 NPM1P13-201ENST00000452663 865 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC016687.1-201ENST00000482574 353 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AP001025.2-201ENST00000490908 477 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC092185.1-201ENST00000491371 97 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 DYNLL1P6-201ENST00000503440 264 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 IGHVIII-44-202ENST00000636235 289 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 XGY1-201ENST00000381172 446 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 MIR181A2-201ENST00000384863 110 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AL139095.1-201ENST00000404326 391 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 RPS3P1-201ENST00000456781 192 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AL355836.1-201ENST00000555951 870 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC006270.2-201ENST00000578523 652 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC006111.3-201ENST00000622137 383 ntBASIC3.38□□□□□ -1.87
RFX7Q2KHR2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX7Q2KHR2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 CUL4AP1-201ENST00000514750 1863 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC092593.1-201ENST00000515413 1815 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC021755.1-201ENST00000559747 1447 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 MIR9-1-201ENST00000385198 89 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 RNA5SP21-201ENST00000410917 96 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC063976.3-201ENST00000426849 329 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 RPS20P32-201ENST00000456044 356 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AP002884.2-201ENST00000471647 395 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 RPL31P13-201ENST00000484151 370 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 POU5F1P7-201ENST00000508759 541 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 RNU2-58P-201ENST00000516403 183 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 HPRT1P3-201ENST00000539521 576 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 NRBF2P5-201ENST00000603087 788 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC012119.1-201ENST00000603184 222 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AC016542.2-201ENST00000624201 619 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 AL359757.2-201ENST00000624309 274 ntBASIC3.37□□□□□ -1.87
RFX7Q2KHR2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 RNU1-112P-201ENST00000364401 164 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 RNU6-304P-201ENST00000364855 107 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 MRPL50P2-201ENST00000416821 482 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 SLC31A1P1-201ENST00000451221 567 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 SNORD109B-201ENST00000458961 67 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 SNORD109A-201ENST00000459128 67 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 AP004242.1-201ENST00000533701 349 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 AC007954.1-201ENST00000554198 494 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 MIR4278-201ENST00000636094 69 ntBASIC3.36□□□□□ -1.87
RFX7Q2KHR2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX7Q2KHR2 DCAF13P3-201ENST00000561147 1334 ntBASIC3.35□□□□□ -1.87
RFX7Q2KHR2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.35□□□□□ -1.87
RFX7Q2KHR2 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms