Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 AC026410.2-201ENST00000460281 156 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 MTND1P16-201ENST00000465177 898 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 RPL7P9-201ENST00000468715 747 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXD4Q12950 COX7A2P2-201ENST00000505291 250 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXD4Q12950 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 ERHP1-201ENST00000523006 310 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXD4Q12950 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXD4Q12950 DUXAP1-201ENST00000556632 463 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXD4Q12950 LARP7P2-201ENST00000575306 125 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 AC008638.3-201ENST00000603341 463 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXD4Q12950 AL365503.1-201ENST00000605247 905 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 AC097478.2-201ENST00000610572 514 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 AC002076.2-201ENST00000617362 122 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXD4Q12950 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD4Q12950 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD4Q12950 MAPK10-362ENST00000641864 4484 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 RNA5SP191-201ENST00000362585 102 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 SNORD113-6-201ENST00000363345 75 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 Y_RNA.169-201ENST00000363745 96 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 U3.30-201ENST00000391308 210 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 ATP5F1P3-201ENST00000397213 657 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD4Q12950 YPEL5P1-201ENST00000419731 367 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AC019178.2-201ENST00000423595 505 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 CHIAP3-201ENST00000423668 1133 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AL050321.1-201ENST00000432363 400 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 NEK4P1-201ENST00000433383 879 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 RPL7P11-201ENST00000437586 658 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 MTND4P6-201ENST00000438297 472 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AC122718.1-201ENST00000439448 744 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD4Q12950 MTND2P20-201ENST00000440805 661 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 CDC27P1-201ENST00000445384 715 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AC079168.2-201ENST00000453977 416 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 FAM133DP-201ENST00000464802 691 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AC053481.1-201ENST00000467217 306 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXD4Q12950 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AC010587.2-201ENST00000511727 448 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD4Q12950 IGHV3-76-201ENST00000522465 295 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AC145350.1-201ENST00000567426 208 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AL121834.1-201ENST00000572284 509 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AC053481.3-201ENST00000577881 843 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AL031281.1-201ENST00000604049 488 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AL031176.1-201ENST00000604554 466 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AL607023.1-201ENST00000620045 248 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AL353748.2-201ENST00000622148 471 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 AL161637.1-201ENST00000622380 412 ntBASIC4.32□□□□□ -1.72
FOXD4Q12950 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXD4Q12950 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.32□□□□□ -1.72
FOXD4Q12950 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD4Q12950 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD4Q12950 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXD4Q12950 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
FOXD4Q12950 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXD4Q12950 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXD4Q12950 SNRPEP2-201ENST00000397592 279 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 MIR298-201ENST00000401212 88 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 RNU6-1077P-201ENST00000410506 102 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXD4Q12950 AC009237.5-201ENST00000414271 501 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 AC245052.5-201ENST00000416320 649 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXD4Q12950 LINC00993-201ENST00000420453 540 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 EIF4EP1-201ENST00000422311 642 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXD4Q12950 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXD4Q12950 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXD4Q12950 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXD4Q12950 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.31□□□□□ -1.72
FOXD4Q12950 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXD4Q12950 MTCO3P11-201ENST00000455103 774 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 U3.44-201ENST00000458938 192 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 MTCO2P6-201ENST00000463134 685 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
FOXD4Q12950 AC011005.3-201ENST00000491624 395 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.31□□□□□ -1.72
FOXD4Q12950 AK3P4-201ENST00000504283 583 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 AC079395.1-201ENST00000510981 262 ntBASIC4.31□□□□□ -1.72
FOXD4Q12950 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms