Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL133384.1-201ENST00000412744 351 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 AC093162.1-201ENST00000419682 124 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX4Q06945 USP9YP16-201ENST00000430287 407 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 MTCYBP9-201ENST00000431021 303 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 RPL34P6-201ENST00000432390 345 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 RHOT1P3-201ENST00000436571 331 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 HSPE1P28-201ENST00000443139 211 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 CEACAMP7-201ENST00000444105 496 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX4Q06945 USP9YP23-201ENST00000455085 407 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX4Q06945 RPL7AP10-201ENST00000481016 791 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX4Q06945 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX4Q06945 AK3P4-201ENST00000504283 583 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 AC004980.4-201ENST00000513375 203 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 RNU6-264P-201ENST00000517134 104 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 RN7SKP147-201ENST00000517154 244 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 SOD1P3-201ENST00000518682 454 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX4Q06945 AP003122.3-201ENST00000526316 255 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 AP003497.1-201ENST00000528472 562 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 AP000907.2-201ENST00000530827 353 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 TRIM51GP-201ENST00000534741 1350 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX4Q06945 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX4Q06945 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX4Q06945 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX4Q06945 MIR3146-201ENST00000580367 79 ntBASIC5.61□□□□□ -1.51
SOX4Q06945 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX4Q06945 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX4Q06945 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX4Q06945 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX4Q06945 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX4Q06945 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX4Q06945 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX4Q06945 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SOX4Q06945 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX4Q06945 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX4Q06945 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SOX4Q06945 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX4Q06945 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX4Q06945 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
SOX4Q06945 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX4Q06945 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 MTND4P1-201ENST00000457501 1466 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 AL161781.1-201ENST00000354277 403 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 RN7SKP104-201ENST00000362605 328 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 RN7SKP145-201ENST00000363291 303 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 RNU4-66P-201ENST00000365199 138 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 SNORA70.6-201ENST00000383934 134 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 RNU6-38P-201ENST00000384085 107 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AC016769.3-201ENST00000396562 315 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AL356421.1-201ENST00000403255 413 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 MRPS21P2-201ENST00000424704 264 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 RPS20P5-201ENST00000434808 360 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 RNU6-333P-201ENST00000459117 107 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AP000797.2-201ENST00000475768 606 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 RPL23AP41-201ENST00000484754 458 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AC231760.1-201ENST00000498002 260 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AC006427.1-201ENST00000514359 712 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 SMURF2P1-201ENST00000514992 481 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 SNORD27.1-201ENST00000516319 72 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 Y_RNA.682-201ENST00000516457 100 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 AP006245.2-201ENST00000522004 300 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX4Q06945 APOOP3-201ENST00000536787 586 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 AC115085.1-201ENST00000588924 229 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AC011626.1-201ENST00000604710 562 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AP000654.2-201ENST00000605633 586 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 HSPE1P14-201ENST00000605812 302 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX4Q06945 AL627230.1-201ENST00000613077 211 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX4Q06945 AL591926.8-201ENST00000616876 211 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 BCORP1-203ENST00000513194 5093 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 AC020633.1-201ENST00000468439 2247 ntBASIC5.6□□□□□ -1.51
SOX4Q06945 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX4Q06945 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms