Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PABPC1P7-201ENST00000413177 1513 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RNU6-1243P-201ENST00000364028 107 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RNU6-335P-201ENST00000364563 113 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RNU6-7-201ENST00000364784 107 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RNA5SP235-201ENST00000365411 114 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RNU6-8-201ENST00000365467 107 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN6P56747 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN6P56747 SNORA51.12-201ENST00000384448 134 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RNU6-328P-201ENST00000390887 106 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AL136116.1-201ENST00000403591 381 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 MIR1250-201ENST00000408098 113 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AC092745.2-202ENST00000411880 369 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN6P56747 MTCYBP24-201ENST00000420387 1106 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN6P56747 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN6P56747 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN6P56747 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN6P56747 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.16□□□□□ -1.9
CLDN6P56747 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN6P56747 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN6P56747 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AC026801.2-201ENST00000515352 425 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RN7SKP116-201ENST00000516902 319 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AC083923.1-201ENST00000523708 376 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN6P56747 HIGD1AP1-201ENST00000550979 275 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 DUXAP6-201ENST00000553858 601 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN6P56747 MIR4425-201ENST00000580572 84 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN6P56747 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN6P56747 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AC007566.2-201ENST00000603642 413 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AL009028.1-201ENST00000604895 802 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AC004775.1-201ENST00000607389 753 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 AC100793.4-201ENST00000613683 429 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN6P56747 U6.98-201ENST00000637157 84 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN6P56747 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN6P56747 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLDN6P56747 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLDN6P56747 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN6P56747 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN6P56747 MTND5P28-201ENST00000438005 1594 ntBASIC3.16□□□□□ -1.9
CLDN6P56747 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN6P56747 SNORA51.2-201ENST00000364595 132 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 MTND4LP20-201ENST00000402379 270 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AC073264.1-201ENST00000411508 416 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN6P56747 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN6P56747 RPL36P19-201ENST00000430744 301 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 MTCO1P43-201ENST00000431831 488 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN6P56747 MRPS18BP2-201ENST00000434310 759 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AL662791.1-201ENST00000441992 928 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 RPS27P5-201ENST00000444247 244 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 MTND5P8-201ENST00000449817 1083 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 MTND2P6-201ENST00000455337 1030 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AC008280.2-201ENST00000455473 307 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.15□□□□□ -1.91
CLDN6P56747 AC109925.1-201ENST00000478069 331 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 KC877373.1-201ENST00000479066 408 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 ACTG1P13-201ENST00000486987 1043 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 HMGB1P38-201ENST00000490557 577 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN6P56747 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN6P56747 RNU6-1231P-201ENST00000517185 103 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AC009812.2-201ENST00000517657 457 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN6P56747 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN6P56747 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN6P56747 AC026333.2-201ENST00000542164 106 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AC027104.1-201ENST00000563702 681 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN6P56747 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN6P56747 UBL5P2-201ENST00000583788 219 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN6P56747 AC008687.2-201ENST00000597865 520 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN6P56747 AC011468.4-201ENST00000603942 409 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN6P56747 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN6P56747 AC017104.5-201ENST00000637647 639 ntBASIC3.15□□□□□ -1.91
CLDN6P56747 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN6P56747 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CLDN6P56747 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN6P56747 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CLDN6P56747 ELL2P4-201ENST00000446870 1376 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN6P56747 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CLDN6P56747 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN6P56747 ENSAP3-201ENST00000312710 333 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN6P56747 AL138880.1-201ENST00000405824 642 ntBASIC3.14□□□□□ -1.91
CLDN6P56747 RN7SKP111-201ENST00000410349 271 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms